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SCN18_13_7_16_R5_B_scaffold_745

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_745_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..106
DNA (105bp) protein (35aa)
UPI0003D1B555 related cluster n=1 Tax=unknown RepID=UPI0003D1B555
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53261.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
thiamine pyrophosphate protein central region
SCN18_13_7_16_R5_B_scaffold_745_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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123..1061
DNA (939bp) protein (313aa)
UPI0003D1B73F related cluster n=1 Tax=unknown RepID=UPI0003D1B73F
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53260.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
NAD-dependent epimerase/dehydratase
SCN18_13_7_16_R5_B_scaffold_745_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1063..2739
DNA (1677bp) protein (559aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TD51_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04389.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
SCN18_13_7_16_R5_B_scaffold_745_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2744..3211)
DNA (468bp) protein (156aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
UPI0003D1BA36 related cluster n=1 Tax=unknown RepID=UPI0003D1BA36
3-dehydroquinate dehydratase II
SCN18_13_7_16_R5_B_scaffold_745_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3333..3698
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RUX5_9RHIZ
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:KID12326.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
cupin
SCN18_13_7_16_R5_B_scaffold_745_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3702..4688
DNA (987bp) protein (329aa)
UPI0003D1C810 related cluster n=1 Tax=unknown RepID=UPI0003D1C810
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53257.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
NAD-dependent epimerase/dehydratase
SCN18_13_7_16_R5_B_scaffold_745_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4685..5602
DNA (918bp) protein (306aa)
UPI0003D1B918 related cluster n=1 Tax=unknown RepID=UPI0003D1B918
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53256.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
NAD-dependent epimerase/dehydratase
SCN18_13_7_16_R5_B_scaffold_745_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5777..6598
DNA (822bp) protein (274aa)
UPI0003D1B71B related cluster n=1 Tax=unknown RepID=UPI0003D1B71B
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53254.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
IclR family transcriptional regulator
SCN18_13_7_16_R5_B_scaffold_745_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6676..7332
DNA (657bp) protein (219aa)
UPI0003D1B5B5 related cluster n=1 Tax=unknown RepID=UPI0003D1B5B5
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53253.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_745_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7375..8397
DNA (1023bp) protein (341aa)
NAD(P)-dependent oxidoreductase (EC:1.1.-.-)
UPI0003D1A0FF related cluster n=1 Tax=unknown RepID=UPI0003D1A0FF
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53252.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
SCN18_13_7_16_R5_B_scaffold_745_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8420..9274
DNA (855bp) protein (285aa)
UPI0003D1A6CF related cluster n=1 Tax=unknown RepID=UPI0003D1A6CF
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53251.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
NAD-dependent epimerase/dehydratase
SCN18_13_7_16_R5_B_scaffold_745_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9308..10135
DNA (828bp) protein (276aa)
UPI0003D1BFD8 related cluster n=1 Tax=unknown RepID=UPI0003D1BFD8
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53250.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
xylose isomerase domain-containing protein
SCN18_13_7_16_R5_B_scaffold_745_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10132..11208
DNA (1077bp) protein (359aa)
UPI0003D1C1D1 related cluster n=1 Tax=unknown RepID=UPI0003D1C1D1
Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:ETA53249.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_745_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11223..12011
DNA (789bp) protein (263aa)
Aldehyde dehydrogenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QSA7_9BURK
putative aldehyde dehydrogenase
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:AHG63492.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
Displaying 14 items

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