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SCN18_13_7_16_R5_B_scaffold_774

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R5_B_scaffold_774_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..371
DNA (369bp) protein (123aa)
Putative RND efflux transporter n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HY52_AZOC5
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:KFC67255.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RND efflux transporter
SCN18_13_7_16_R5_B_scaffold_774_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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503..1483
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KHM3_METEX
30S ribosomal protein S21 {ECO:0000313|EMBL:KFC67253.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_774_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1641..2735
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UNR3_METS4
30S ribosomal protein S21 {ECO:0000313|EMBL:KFC67253.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_774_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2903..3952
DNA (1050bp) protein (350aa)
aldolase n=1 Tax=Methylocystis rosea RepID=UPI000365C1A3
Citrate lyase beta subunit {ECO:0000313|EMBL:KFC61545.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HpcH/HpaI aldolase
SCN18_13_7_16_R5_B_scaffold_774_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4074..4403
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RKK5_9RHIZ
Hemimethylated DNA binding protein {ECO:0000313|EMBL:KFC61544.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hemimethylated DNA binding protein
SCN18_13_7_16_R5_B_scaffold_774_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4578..5975)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E12D9B
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GTPase
SCN18_13_7_16_R5_B_scaffold_774_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5979..6227)
DNA (249bp) protein (83aa)
RNA-binding protein Hfq n=3 Tax=Methylobacterium RepID=HFQ_METRJ
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
RNA chaperone Hfq
SCN18_13_7_16_R5_B_scaffold_774_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6424..7791)
DNA (1368bp) protein (456aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0L5_9RHIZ
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:KFC61606.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Fis family two component sigma54 specific transcriptional regulator
SCN18_13_7_16_R5_B_scaffold_774_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7788..10064)
DNA (2277bp) protein (759aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000375FE38
multi-sensor signal transduction histidine kinase
SCN18_13_7_16_R5_B_scaffold_774_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10289..11089
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DBL8_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:EJZ34985.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
SCN18_13_7_16_R5_B_scaffold_774_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11167..11652)
DNA (486bp) protein (162aa)
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UHN0_METS4
Nitrogen assimilation regulatory protein {ECO:0000313|EMBL:KFC61604.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Fis family nitrogen metabolism transcriptional regulator NtrC
Displaying 11 items

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