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SCN18_10_11_15_R4_B_scaffold_1040

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_1040_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..318)
DNA (318bp) protein (106aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVV8_9RHIZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHK55112.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acetyltransferase domain protein
SCN18_10_11_15_R4_B_scaffold_1040_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(315..602)
DNA (288bp) protein (96aa)
Glutamyl-tRNA(Gln) amidotransferase subunit C; Short=Glu-ADT subunit C;; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00122};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Glutamyl-tRNA(Gln) amidotransferase subunit C n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=GATC_RHILO
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C
SCN18_10_11_15_R4_B_scaffold_1040_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..1409)
DNA (708bp) protein (236aa)
UPF0173 metal-dependent hydrolase MEA186_12978 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9H6_9RHIZ
UPF0173 metal-dependent hydrolase MEA186_12978 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
metal-dependent hydrolase
SCN18_10_11_15_R4_B_scaffold_1040_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1481..1966
DNA (486bp) protein (162aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
Holliday junction resolvase n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HD60_9RHIZ
RNAse H-fold protein YqgF
SCN18_10_11_15_R4_B_scaffold_1040_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1912..2244)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MFT1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF19560.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1040_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2244..2789)
DNA (546bp) protein (182aa)
SCN18_10_11_15_R4_B_scaffold_1040_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2932..3663
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P994_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF43776.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1040_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3660..4355
DNA (696bp) protein (232aa)
Molecular chaperone DnaJ n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HDX2_9RHIZ
Molecular chaperone DnaJ {ECO:0000313|EMBL:ESZ56711.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1040_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4478..5857)
DNA (1380bp) protein (460aa)
beta-lactamase (EC:3.5.2.6)
Beta-lactamase {ECO:0000313|EMBL:ADV13112.1}; EC=3.5.2.6 {ECO:0000313|EMBL:ADV13112.1};; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003637A95
SCN18_10_11_15_R4_B_scaffold_1040_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6153..6482
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FCG0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV14041.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
phasin family protein
SCN18_10_11_15_R4_B_scaffold_1040_11
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6674..7093
DNA (420bp) protein (140aa)
ATP-dependent Clp protease ClpS n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FEA30
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ATP-dependent Clp protease adaptor protein ClpS
SCN18_10_11_15_R4_B_scaffold_1040_12
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7101..9572
DNA (2472bp) protein (824aa)
ATP-dependent Clp protease ATP-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DE951D
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:EHK55125.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
endopeptidase Clp ATP-binding protein subunit A
SCN18_10_11_15_R4_B_scaffold_1040_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9962..10387)
DNA (426bp) protein (142aa)
HIT family hydrolase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N5V9_9RHIZ
HIT family hydrolase {ECO:0000313|EMBL:EKF19543.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
HIT family hydrolase, diadenosine tetraphosphate hydrolase
SCN18_10_11_15_R4_B_scaffold_1040_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10426..10887)
DNA (462bp) protein (154aa)
Prolyl-tRNA synthetase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F3T1_9RHIZ
Prolyl-tRNA synthetase {ECO:0000313|EMBL:ESX47573.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1040_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11007..12212)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVX8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55132.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1040_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12291..13022)
DNA (732bp) protein (244aa)
UPI0003CF7E7C related cluster n=1 Tax=unknown RepID=UPI0003CF7E7C
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ESY72972.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
glycerophosphoryl diester phosphodiesterase
SCN18_10_11_15_R4_B_scaffold_1040_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13032..13496)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVY0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55134.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
endoribonuclease L-PSP
SCN18_10_11_15_R4_B_scaffold_1040_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13635..14462
DNA (828bp) protein (276aa)
ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379617A
Uncharacterized protein {ECO:0000313|EMBL:CDX24666.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1040_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14465..14848
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003714FDC
bleomycin resistance protein
Bleomycin resistance protein {ECO:0000313|EMBL:KEA06155.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCN18_10_11_15_R4_B_scaffold_1040_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15025..15804
DNA (780bp) protein (260aa)
UPI0003CE3727 related cluster n=1 Tax=unknown RepID=UPI0003CE3727
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
30S ribosomal protein S2
SCN18_10_11_15_R4_B_scaffold_1040_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15917..16840
DNA (924bp) protein (308aa)
Elongation factor Ts n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MBL1_9RHIZ
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
tsf; elongation factor Ts
SCN18_10_11_15_R4_B_scaffold_1040_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17033..17752
DNA (720bp) protein (240aa)
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UK {ECO:0000255|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000255|HAMAP-Rule:MF_01220};; Uridine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_01220}; Short=UMP kinase {ECO:0000255|HAMAP-Rule:MF_01220};; Short=UMPK {ECO:0000255|HAMAP-Rule:MF_01220};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Uridylate kinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=PYRH_MESSB
SCN18_10_11_15_R4_B_scaffold_1040_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17810..18370
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVY7_9RHIZ
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
frr; ribosome recycling factor
SCN18_10_11_15_R4_B_scaffold_1040_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18525..19238
DNA (714bp) protein (238aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Nitratireductor indicus C115 RepID=K2P0N4_9RHIZ
SCN18_10_11_15_R4_B_scaffold_1040_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19235..20101
DNA (867bp) protein (289aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Phosphatidate cytidylyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVY9_9RHIZ
phosphatidate cytidylyltransferase
SCN18_10_11_15_R4_B_scaffold_1040_26
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20190..21329
DNA (1140bp) protein (380aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Peptidase RseP n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C8L0_9RHIZ
peptidase RseP
Displaying 26 items

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