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SCN18_10_11_15_R4_B_scaffold_1063

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_1063_1
unknown

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comp(2..97)
DNA (96bp) protein (32aa)
glk; glucokinase (EC:2.7.1.2)
SCN18_10_11_15_R4_B_scaffold_1063_2
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

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comp(121..513)
DNA (393bp) protein (131aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Methylglyoxal synthase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CB1_MESSB
SCN18_10_11_15_R4_B_scaffold_1063_3
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

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comp(624..1655)
DNA (1032bp) protein (344aa)
Penicillin-insensitive murein endopeptidase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M495_9RHIZ
Penicillin-insensitive murein endopeptidase {ECO:0000313|EMBL:EKF16851.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
mepA; penicillin-insensitive murein endopeptidase
SCN18_10_11_15_R4_B_scaffold_1063_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1781..2665)
DNA (885bp) protein (295aa)
Oxidoreductase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1B2_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:EXL09197.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
NAD-dependent epimerase/dehydratase
SCN18_10_11_15_R4_B_scaffold_1063_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2662..3828)
DNA (1167bp) protein (389aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Epoxyqueuosine reductase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y8X2_MESOW
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1063_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3828..4517)
DNA (690bp) protein (230aa)
Glutathione S-transferase domain n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TFP7_MESCW
glutathione S-transferase
Glutathione S-transferase domain {ECO:0000313|EMBL:ADV09927.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_10_11_15_R4_B_scaffold_1063_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4662..5468
DNA (807bp) protein (269aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003CFA651 related cluster n=1 Tax=unknown RepID=UPI0003CFA651
undecaprenol kinase
SCN18_10_11_15_R4_B_scaffold_1063_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5473..6240)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJC0_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59166.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1063_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6356..7330)
DNA (975bp) protein (325aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJB9_9RHIZ
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EHK59165.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NAD-dependent epimerase/dehydratase
SCN18_10_11_15_R4_B_scaffold_1063_10
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7447..7845)
DNA (399bp) protein (133aa)
Putative ferric uptake regulator, Fur family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11B55_MESSB
ferric uptake regulator family protein
Putative ferric uptake regulator, Fur family {ECO:0000313|EMBL:ABG65370.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_1063_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7842..8669)
DNA (828bp) protein (276aa)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2PTD2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN83496.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1063_12
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8662..9543)
DNA (882bp) protein (294aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
zinc ABC transporter ATP-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B58506
ABC transporter
SCN18_10_11_15_R4_B_scaffold_1063_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9659..10600
DNA (942bp) protein (314aa)
Periplasmic solute binding protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N7D5_9RHIZ
Periplasmic solute binding protein {ECO:0000313|EMBL:EKF20033.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
znuA; zinc uptake ABC transporter
SCN18_10_11_15_R4_B_scaffold_1063_14
unknown

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10637..11284
DNA (648bp) protein (216aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_1063_15
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11444..11641)
DNA (198bp) protein (66aa)
CsbD-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MH44_9RHIZ
CsbD-like protein {ECO:0000313|EMBL:EKF20035.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
CsbD-like protein
SCN18_10_11_15_R4_B_scaffold_1063_16
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11821..13521)
DNA (1701bp) protein (567aa)
30S ribosomal protein S1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CA0_MESSB
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_1063_17
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13742..14392)
DNA (651bp) protein (217aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0E9_MESOW
SCN18_10_11_15_R4_B_scaffold_1063_18
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14389..15027)
DNA (639bp) protein (213aa)
DSBA oxidoreductase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CW41_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGF70334.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
2-hydroxychromene-2-carboxylate isomerase
SCN18_10_11_15_R4_B_scaffold_1063_19
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15074..15715)
DNA (642bp) protein (214aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2B3V9_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJJ30665.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_1063_20
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15730..16431)
DNA (702bp) protein (234aa)
3-oxoacyl-ACP reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI000367A304
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44033.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase/reductase SDR
SCN18_10_11_15_R4_B_scaffold_1063_21
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(16442..16828)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036240F6
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43505.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCN18_10_11_15_R4_B_scaffold_1063_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16865..18358)
DNA (1494bp) protein (498aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
UPI0003CE791E related cluster n=1 Tax=unknown RepID=UPI0003CE791E
SCN18_10_11_15_R4_B_scaffold_1063_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18479..18856
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11C96_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG64979.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_1063_trna_1
unknown

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19024..19096
DNA (73bp)
transferRNA Ala
SCN18_10_11_15_R4_B_scaffold_1063_24
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19332..20558
DNA (1227bp) protein (409aa)
Integrase family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JM95_9PROT
phage integrase
Phage integrase {ECO:0000313|EMBL:AJZ58260.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCN18_10_11_15_R4_B_scaffold_1063_25
unknown

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20870..21013
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 26 items

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