ggKbase home page

SCN18_10_11_15_R4_B_scaffold_1145

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_1145_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..812)
DNA (810bp) protein (270aa)
Copper resistance protein C n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Q6W132_RHISN
Copper export protein
Copper export protein {ECO:0000313|EMBL:KEC78346.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCN18_10_11_15_R4_B_scaffold_1145_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(812..1339)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A3Y3_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE95439.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCN18_10_11_15_R4_B_scaffold_1145_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1472..1846)
DNA (375bp) protein (125aa)
SCN18_10_11_15_R4_B_scaffold_1145_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2186..2674
DNA (489bp) protein (163aa)
30S ribosomal protein S6 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLI8_MESCW
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
30S ribosomal protein S6
SCN18_10_11_15_R4_B_scaffold_1145_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2674..2922
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FF528A
rpsR; ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
SCN18_10_11_15_R4_B_scaffold_1145_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3096..3686
DNA (591bp) protein (197aa)
PREDICTED: 50S ribosomal protein L9, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16E1A
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
50S ribosomal protein L9
SCN18_10_11_15_R4_B_scaffold_1145_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3890..5200
DNA (1311bp) protein (437aa)
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSZ5_MESAW
methyltransferase, cyclopropane fatty acid synthase
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AEH89668.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_10_11_15_R4_B_scaffold_1145_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5289..5813)
DNA (525bp) protein (175aa)
UPI0003CDFE8B related cluster n=1 Tax=unknown RepID=UPI0003CDFE8B
Cytochrome B561 {ECO:0000313|EMBL:ESY77377.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
cytochrome B561
SCN18_10_11_15_R4_B_scaffold_1145_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6113..7603
DNA (1491bp) protein (497aa)
replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase {ECO:0000313|EMBL:ABG62384.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABG62384.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
DNA helicase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F9D74D
SCN18_10_11_15_R4_B_scaffold_1145_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7606..8787
DNA (1182bp) protein (394aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Alanine racemase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JP2_MESSB
SCN18_10_11_15_R4_B_scaffold_1145_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8780..10177
DNA (1398bp) protein (466aa)
UPI0003CFB292 related cluster n=1 Tax=unknown RepID=UPI0003CFB292
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
DNA repair protein RadA
SCN18_10_11_15_R4_B_scaffold_1145_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10228..10902
DNA (675bp) protein (225aa)
Colicin V production protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQK2_9RHIZ
Colicin V production protein {ECO:0000313|EMBL:EHK56979.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Colicin V production protein
SCN18_10_11_15_R4_B_scaffold_1145_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10957..12426
DNA (1470bp) protein (490aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
UPI0003CF4615 related cluster n=1 Tax=unknown RepID=UPI0003CF4615
SCN18_10_11_15_R4_B_scaffold_1145_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12458..12775)
DNA (318bp) protein (106aa)
multidrug transporter n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D5236B
Molecular chaperone {ECO:0000313|EMBL:EZQ14788.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
small multidrug resistance protein
SCN18_10_11_15_R4_B_scaffold_1145_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12972..13781
DNA (810bp) protein (270aa)
PREDICTED: tropinone reductase 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11A86
Oxidoreductase {ECO:0000313|EMBL:ESX92444.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
short-chain dehydrogenase/reductase SDR
SCN18_10_11_15_R4_B_scaffold_1145_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13865..14257
DNA (393bp) protein (131aa)
SCN18_10_11_15_R4_B_scaffold_1145_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14375..15061
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F364B1
2-acyl-glycerophospho-ethanolamine acyltransferase {ECO:0000313|EMBL:ESZ49079.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
SCN18_10_11_15_R4_B_scaffold_1145_18
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15068..15877)
DNA (810bp) protein (270aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MHZ9_9RHIZ
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EKF20355.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase
SCN18_10_11_15_R4_B_scaffold_1145_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15877..16575)
DNA (699bp) protein (233aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Nitratireductor indicus C115 RepID=K2N619_9RHIZ
SCN18_10_11_15_R4_B_scaffold_1145_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16657..17163)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MA9_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61466.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_1145_21
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17186..19045)
DNA (1860bp) protein (620aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQL5_9RHIZ
ABC transporter {ECO:0000313|EMBL:EHK56992.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter
SCN18_10_11_15_R4_B_scaffold_1145_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19100..19432)
DNA (333bp) protein (111aa)
ArsR family transcription regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQL6_9RHIZ
ArsR family transcription regulator {ECO:0000313|EMBL:EHK56993.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ArsR family transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_1145_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19545..19997)
DNA (453bp) protein (151aa)
Peptidoglycan-binding LysM (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQL7_9RHIZ
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EHK56994.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
peptidoglycan-binding lysin domain-containing protein
Displaying 23 items

View Taxonomy