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SCN18_10_11_15_R4_B_scaffold_1161

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_1161_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1391)
DNA (1389bp) protein (463aa)
AMP-dependent synthetase and ligase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IG06_XANP2
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS66949.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_B_scaffold_1161_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1426..2337)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7F6_9PROT
dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCN18_10_11_15_R4_B_scaffold_1161_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2429..4036)
DNA (1608bp) protein (536aa)
Peptide/opine/nickel ABC transporter periplasmic ligand-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N253_9RHIZ
Peptide/opine/nickel ABC transporter periplasmic ligand-binding protein {ECO:0000313|EMBL:EKF41533.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
peptide/nickel transport system substrate-binding protein
SCN18_10_11_15_R4_B_scaffold_1161_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4380..5729)
DNA (1350bp) protein (450aa)
D-amino acid oxidase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JL53_AGRRK
D-amino acid oxidase {ECO:0000313|EMBL:KJB95670.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
D-amino acid oxidase
SCN18_10_11_15_R4_B_scaffold_1161_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6108..6311)
DNA (204bp) protein (68aa)
SCN18_10_11_15_R4_B_scaffold_1161_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6438..7463)
DNA (1026bp) protein (342aa)
alcohol dehydrogenase n=1 Tax=Rhizobium radiobacter RepID=UPI0003626A23
NADPH:quinone reductase
NADPH:quinone reductase {ECO:0000313|EMBL:CDN51343.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_10_11_15_R4_B_scaffold_1161_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7485..9311)
DNA (1827bp) protein (609aa)
gamma-glutamyltranspeptidase (EC:2.3.2.2)
Putative gamma-glutamyltranspeptidase {ECO:0000313|EMBL:CAL76328.1}; EC=2.3.2.2 {ECO:0000313|EMBL:CAL76328.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
Putative gamma-glutamyltranspeptidase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YR02_BRASO
SCN18_10_11_15_R4_B_scaffold_1161_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9308..9877)
DNA (570bp) protein (190aa)
Transcriptional regulator, AsnC family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CT61_TRURR
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADI15524.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
SCN18_10_11_15_R4_B_scaffold_1161_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10102..11157
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI00030B4EC9
spermidine/putrescine ABC transporter substrate-binding protein
Tax=RBG_16_Armatimonadetes_67_12_curated
SCN18_10_11_15_R4_B_scaffold_1161_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11267..12352
DNA (1086bp) protein (362aa)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=POTA_RUBXD
Putrescine transport ATP-binding protein PotA {ECO:0000313|EMBL:CDP52049.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
spermidine/putrescine ABC transporter ATP-binding subunit
SCN18_10_11_15_R4_B_scaffold_1161_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12345..13253
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Paenibacillus sp. PAMC 26794 RepID=UPI0002EF78F5
Spermidine Putrescine ABC transporter permease com ponent PotB {ECO:0000313|EMBL:CDP52048.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter permease
SCN18_10_11_15_R4_B_scaffold_1161_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13256..14089
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI00037C90FE
Spermidine Putrescine ABC transporter permease com ponent potC {ECO:0000313|EMBL:CDP52047.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
spermidine/putrescine ABC transporter permease
SCN18_10_11_15_R4_B_scaffold_1161_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14086..15849
DNA (1764bp) protein (588aa)
Peptidase, M28 family n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K7A3_SACES
Uncharacterized protein {ECO:0000313|EMBL:CDP52046.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Peptidase, M28 family
SCN18_10_11_15_R4_B_scaffold_1161_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15855..16646
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K4F2_SACES
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDP52045.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1161_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16646..17659
DNA (1014bp) protein (338aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
2-dehydropantoate 2-reductase n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K2C6_SACES
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1161_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17715..18923)
DNA (1209bp) protein (403aa)
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C1797
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KFE36207.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
Acyl-CoA dehydrogenase
SCN18_10_11_15_R4_B_scaffold_1161_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18938..19687)
DNA (750bp) protein (250aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUF0_9RHIZ
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCV07543.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Displaying 17 items

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