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SCN18_10_11_15_R4_B_scaffold_1375

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_1375_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..930)
DNA (930bp) protein (310aa)
acetolactate synthase large subunit (EC:2.2.1.6)
Putative acetolactate synthase large subunit n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X3I6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHS00872.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCN18_10_11_15_R4_B_scaffold_1375_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1190..2803
DNA (1614bp) protein (538aa)
ABC transporter substrate binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I8F3_AZOC5
ABC transporter substrate-binding protein
ABC transporter substrate binding protein {ECO:0000313|EMBL:BAF88653.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_B_scaffold_1375_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2800..3507
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1B6_VARPS
Aspartate racemase {ECO:0000313|EMBL:CDX25386.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1375_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3522..4514
DNA (993bp) protein (331aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJ09_XANP2
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS68002.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_10_11_15_R4_B_scaffold_1375_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4514..5350
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0003819704
oligopeptide/dipeptide ABC transporter permease
Oligopeptide/dipeptide ABC transporter permease component protein {ECO:0000313|EMBL:BAF88650.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_B_scaffold_1375_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5350..6336
DNA (987bp) protein (329aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein n=2 Tax=Burkholderia thailandensis RepID=N0ANT0_BURTH
oligopeptide/dipeptide ABC transporter, ATP-binding, C-terminal domain protein
ABC transporter ATP-binding protein oligo/dipeptide transport protein {ECO:0000313|EMBL:BAM90564.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_10_11_15_R4_B_scaffold_1375_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6333..7142
DNA (810bp) protein (270aa)
Peptide/nickel transport system ATP-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P1N2_AZOS1
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB09138.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
peptide ABC transporter ATP-binding protein
SCN18_10_11_15_R4_B_scaffold_1375_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7162..8490)
DNA (1329bp) protein (443aa)
4-hydroxybenzoate decarboxylase (EC:4.1.1.61)
4-hydroxybenzoate decarboxylase n=1 Tax=Pseudomonas sp. CFII64 RepID=S6HBI0_9PSED
4-hydroxybenzoate decarboxylase {ECO:0000313|EMBL:EPJ84680.1}; TaxID=911242 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII64.;"
SCN18_10_11_15_R4_B_scaffold_1375_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8663..10054
DNA (1392bp) protein (464aa)
Aldehyde Dehydrogenase n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XME5_STAC7
Aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:AFZ33658.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
SCN18_10_11_15_R4_B_scaffold_1375_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10068..11261
DNA (1194bp) protein (398aa)
kynureninase (EC:3.7.1.3)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Kynureninase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EQH7_BRASB
SCN18_10_11_15_R4_B_scaffold_1375_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11258..12091
DNA (834bp) protein (278aa)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan oxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophan pyrrolase {ECO:0000256|HAMAP-Rule:MF_01972}; Tryptophanase {ECO:0000256|HAMAP-Rule:MF_01972}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Tryptophan 2,3-dioxygenase n=1 Tax=Rhizobium sp. CF080 RepID=J2RNX6_9RHIZ
Tryptophan 2,3-dioxygenase
SCN18_10_11_15_R4_B_scaffold_1375_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12088..12660
DNA (573bp) protein (191aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IL38_METNO
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
SCN18_10_11_15_R4_B_scaffold_1375_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12681..13817
DNA (1137bp) protein (379aa)
Transcriptional regulator, AraC family n=2 Tax=Burkholderia RepID=B2SZW8_BURPP
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACD14529.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCN18_10_11_15_R4_B_scaffold_1375_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13822..14685)
DNA (864bp) protein (288aa)
short-chain dehydrogenase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D32A0
Putative oxidoreductase {ECO:0000313|EMBL:GAD50764.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
SCN18_10_11_15_R4_B_scaffold_1375_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14682..15131)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D2A9A
hypothetical protein
SnoaL-like domain protein {ECO:0000313|EMBL:AIO27277.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
SCN18_10_11_15_R4_B_scaffold_1375_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15128..16036)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CE3DF
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EGD23309.1}; TaxID=525370 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi ATCC 33707.;"
NAD-dependent epimerase/dehydratase
SCN18_10_11_15_R4_B_scaffold_1375_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16114..16788)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DF826
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:CCA90246.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Displaying 17 items

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