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SCN18_10_11_15_R4_B_scaffold_231

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_231_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..341)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000361A2F4
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI25656.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
ABC transporter-like protein
SCN18_10_11_15_R4_B_scaffold_231_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(338..1180)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=3 Tax=Halomonas RepID=G4FBU3_9GAMM
ABC-type transporter, integral membrane subunit
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AJY52104.1}; Flags: Precursor;; TaxID=1504981 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. KO116.;"
SCN18_10_11_15_R4_B_scaffold_231_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1177..2154)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030712D0
ABC transporter permease protein {ECO:0000313|EMBL:EAR52653.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
dppB1; dipeptide ABC transporter, permease component
SCN18_10_11_15_R4_B_scaffold_231_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2328..3074)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003820347
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCN18_10_11_15_R4_B_scaffold_231_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3232..4356)
DNA (1125bp) protein (375aa)
mandelate racemase/muconate lactonizing enzyme (EC:5.1.-.-)
Putative mandelate racemase/muconate lactonizing enzyme {ECO:0000313|EMBL:CAP43245.1}; EC=5.1.-.- {ECO:0000313|EMBL:CAP43245.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Putative mandelate racemase/muconate lactonizing enzyme n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IS20_BORPD
SCN18_10_11_15_R4_B_scaffold_231_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4367..5203)
DNA (837bp) protein (279aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628EDF
ABC transporter permease {ECO:0000313|EMBL:KKB08919.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter permease
SCN18_10_11_15_R4_B_scaffold_231_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5203..6099)
DNA (897bp) protein (299aa)
binding-protein-dependent transport systems inner membrane component n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628EE0
ABC transporter permease {ECO:0000313|EMBL:KKB08918.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
binding-protein-dependent transport systems inner membrane component
SCN18_10_11_15_R4_B_scaffold_231_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6136..7410)
DNA (1275bp) protein (425aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036455FA
extracellular solute-binding protein family 1
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACS59833.1}; Flags: Precursor;; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCN18_10_11_15_R4_B_scaffold_231_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7455..8555
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CGT4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR51851.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
amidohydrolase 2 protein
SCN18_10_11_15_R4_B_scaffold_231_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8577..9638
DNA (1062bp) protein (354aa)
ABC transporter related n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M400_METRJ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAN49320.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
ABC transporter-like protein
SCN18_10_11_15_R4_B_scaffold_231_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..10506
DNA (834bp) protein (278aa)
Dehydrogenase n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WE57_9BURK
Dehydrogenase {ECO:0000313|EMBL:CDX43676.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
short chain dehydrogenase family protein
SCN18_10_11_15_R4_B_scaffold_231_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10536..11702
DNA (1167bp) protein (389aa)
Altronate dehydratase {ECO:0000313|EMBL:CDX28509.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CDX28509.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Altronate dehydratase (EC:4.2.1.7)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D8E5F0
SCN18_10_11_15_R4_B_scaffold_231_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11672..12001
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000319D8EE
UxaA family hydrolase
UxaA family hydrolase {ECO:0000313|EMBL:AFC28338.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
SCN18_10_11_15_R4_B_scaffold_231_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12100..12765
DNA (666bp) protein (222aa)
SCN18_10_11_15_R4_B_scaffold_231_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12785..13723
DNA (939bp) protein (313aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TW71_TISMK
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCN18_10_11_15_R4_B_scaffold_231_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13854..15491
DNA (1638bp) protein (546aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6U1_SPHTD
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACZ37702.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCN18_10_11_15_R4_B_scaffold_231_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15583..17130
DNA (1548bp) protein (516aa)
4-phytase (EC:3.1.3.26)
4-phytase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VD32_SPHWW
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCN18_10_11_15_R4_B_scaffold_231_18
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17120..17797
DNA (678bp) protein (226aa)
Transcriptional regulator, GntR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAM4_CONWI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB51187.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_10_11_15_R4_B_scaffold_231_19
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17817..18986)
DNA (1170bp) protein (390aa)
aspartate transaminase (EC:2.6.1.1)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N8Q5_9ACTO
Tax=RBG_16_Actinobacteria_67_15_curated
SCN18_10_11_15_R4_B_scaffold_231_20
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19128..20012
DNA (885bp) protein (295aa)
hpcE; fumarylacetoacetate hydrolase family protein (EC:5.3.3.-)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P3Y8_9FIRM
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
SCN18_10_11_15_R4_B_scaffold_231_21
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20005..20814
DNA (810bp) protein (270aa)
3-oxoacyl-(Acyl-carrier-protein) reductase FabG {ECO:0000313|EMBL:CDW94253.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDW94253.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5H9_THIK1
3-oxoacyl-(acyl-carrier-protein) reductase
SCN18_10_11_15_R4_B_scaffold_231_22
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20823..21572
DNA (750bp) protein (250aa)
beta-lactamase domain-containing protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000288AA63
Uncharacterized protein {ECO:0000313|EMBL:KIL40361.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
metallo-beta-lactamase-like protein
SCN18_10_11_15_R4_B_scaffold_231_23
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21581..22771
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036B72DF
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase {ECO:0000313|EMBL:EDL61841.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
SCN18_10_11_15_R4_B_scaffold_231_24
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22800..23636
DNA (837bp) protein (279aa)
putative hydrolase or acyltransferase of alpha/beta superfamily
Putative hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) id=2238932 bin=GWB2_Chloroflexi_49_20 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_10_11_15_R4_B_scaffold_231_25
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23708..24667
DNA (960bp) protein (320aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z006_9GAMM
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EIC21179.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
dipeptide/oligopeptide/nickel ABC transporter permease
SCN18_10_11_15_R4_B_scaffold_231_26
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24664..26628
DNA (1965bp) protein (655aa)
peptide ABC transporter permease n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D8D0C9
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADB50358.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCN18_10_11_15_R4_B_scaffold_231_27
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26625..27416
DNA (792bp) protein (264aa)
Oligopeptide/dipeptide ABC transporter ATPase subunit n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FA39_VERMA
Uncharacterized protein {ECO:0000313|EMBL:KFL31282.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptide ABC transporter ATPase
SCN18_10_11_15_R4_B_scaffold_231_28
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27433..28101)
DNA (669bp) protein (223aa)
phosphohydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003646DB2
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:AEV37322.1}; TaxID=911045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
SCN18_10_11_15_R4_B_scaffold_231_29
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28098..29237)
DNA (1140bp) protein (380aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D3F62
ABC transporter-like protein {ECO:0000313|EMBL:EID14955.1}; TaxID=1150599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium phlei RIVM601174.;"
lacK2; lactose transport ATP-binding protein LacK
SCN18_10_11_15_R4_B_scaffold_231_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29269..30111)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000362CFEB
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:CEJ15302.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein dependent transport system inner membrane protein
Displaying items 1-30 of 74 in total

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