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SCN18_10_11_15_R4_B_scaffold_557

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_557_1
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(231..554)
DNA (324bp) protein (108aa)
ISPsy20, transposase IstB, transcriptional regulator, LysR family-fusion n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2Y7_9BRAD
ISPsy20, transposase IstB, transcriptional regulator, LysR family-fusion {ECO:0000313|EMBL:EAQ33401.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
putative integrase
SCN18_10_11_15_R4_B_scaffold_557_2
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(704..1303)
DNA (600bp) protein (200aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MI8_MESSB
ErfK/YbiS/YcfS/YnhG
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABG61381.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_557_3
unknown

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1326..1892
DNA (567bp) protein (189aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_557_4
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2300..2887
DNA (588bp) protein (196aa)
Fur family transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBU9_9RHIZ
Fur family transcriptional regulator
Fur family transcriptional regulator {ECO:0000313|EMBL:AHB48351.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R4_B_scaffold_557_5
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2893..3279
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y967_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH86439.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCN18_10_11_15_R4_B_scaffold_557_6
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3716..4339)
DNA (624bp) protein (208aa)
Co/Zn/Cd efflux system component n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2I6_9RHOB
Cation efflux protein {ECO:0000313|EMBL:KFB09619.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
Co/Zn/Cd efflux system component
SCN18_10_11_15_R4_B_scaffold_557_7
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4719..7262)
DNA (2544bp) protein (848aa)
Vitamin K epoxide reductase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B7B005
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KGM56793.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
nucleoside-diphosphate-sugar epimerase
SCN18_10_11_15_R4_B_scaffold_557_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7294..7410)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGX0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESW84552.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCN18_10_11_15_R4_B_scaffold_557_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7472..7669)
DNA (198bp) protein (66aa)
SCN18_10_11_15_R4_B_scaffold_557_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7759..8016)
DNA (258bp) protein (86aa)
cytochrome C biogenesis protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B40886
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGF71064.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
cytochrome c biogenesis protein transmembrane region
SCN18_10_11_15_R4_B_scaffold_557_11
unknown

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8392..8565
DNA (174bp) protein (58aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_557_12
unknown

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comp(8766..9152)
DNA (387bp) protein (129aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_557_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9647..10189
DNA (543bp) protein (181aa)
Uncharacterized protein {ECO:0000313|EMBL:KEQ08754.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
Putative periplasmic ligand-binding sensor protein id=24614261 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
SCN18_10_11_15_R4_B_scaffold_557_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10273..11220
DNA (948bp) protein (316aa)
cation transporter n=1 Tax=Salisaeta longa RepID=UPI0003B4A193
Cobalt-zinc-cadmium resistance protein CzcD {ECO:0000313|EMBL:KFC70280.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
cation diffusion facilitator family transporter
SCN18_10_11_15_R4_B_scaffold_557_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11230..12054
DNA (825bp) protein (275aa)
Cytochrome c oxidase caa3-type assembly factor CtaG-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQ04_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB12759.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_557_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12047..12682
DNA (636bp) protein (212aa)
Cytochrome c, class I n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EK6_MESSB
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABG64169.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_557_17
CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, CN-SCN_Transposase_165x, Mobile_element

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comp(12679..15648)
DNA (2970bp) protein (990aa)
TnpA, transposase n=2 Tax=Bacteria RepID=E8PS46_9BACT
Sphingomonas taxi strain 30a NODE_93, whole genome shotgun sequence {ECO:0000313|EMBL:KIU25823.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
transposase
SCN18_10_11_15_R4_B_scaffold_557_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15667..16275)
DNA (609bp) protein (203aa)
TnpR, resolvase n=2 Tax=Bacteria RepID=E8PRW8_9BACT
Sphingomonas taxi strain 30a NODE_93, whole genome shotgun sequence {ECO:0000313|EMBL:KIU25822.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Resolvase domain protein
SCN18_10_11_15_R4_B_scaffold_557_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16310..16888
DNA (579bp) protein (193aa)
Transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NWS3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EKF42284.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
transcriptional regulatory protein
SCN18_10_11_15_R4_B_scaffold_557_20
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16875..17174)
DNA (300bp) protein (100aa)
cadA; cadmium-transporting ATPase CadA (EC:3.6.3.3)
Cadmium-transporting ATPase CadA {ECO:0000313|EMBL:AEI07617.1}; EC=3.6.3.3 {ECO:0000313|EMBL:AEI07617.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Cadmium-translocating P-type ATPase n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JBV2_OLICO
SCN18_10_11_15_R4_B_scaffold_557_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17263..17658)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NSH5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42285.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_557_22
unknown

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comp(17680..17955)
DNA (276bp) protein (92aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_557_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18058..18279
DNA (222bp) protein (74aa)
Heavy metal transport/detoxification protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4I8_9RHIZ
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:EKF42286.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
heavy metal transport/detoxification protein
SCN18_10_11_15_R4_B_scaffold_557_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18366..20312
DNA (1947bp) protein (649aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitratireductor indicus C115 RepID=K2PMH7_9RHIZ
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKF42287.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Heavy metal translocating P-type ATPase
SCN18_10_11_15_R4_B_scaffold_557_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20405..21049
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4H8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL01589.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_557_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21142..21372
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWS5_9RHIZ
Peroxidase {ECO:0000313|EMBL:EXL01588.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_557_27
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21395..23743)
DNA (2349bp) protein (783aa)
Cation transport ATPase n=1 Tax=Nitratireductor indicus C115 RepID=K2NSI0_9RHIZ
Haloacid dehalogenase {ECO:0000313|EMBL:KGJ12699.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
haloacid dehalogenase
SCN18_10_11_15_R4_B_scaffold_557_28
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23779..25164)
DNA (1386bp) protein (462aa)
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Nitratireductor indicus C115 RepID=K2P4J2_9RHIZ
Mercuric reductase {ECO:0000313|EMBL:KGJ12698.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
pyridine nucleotide-disulfide oxidoreductase dimerisation region
SCN18_10_11_15_R4_B_scaffold_557_29
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(25333..27282)
DNA (1950bp) protein (650aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-)
Heavy metal translocating P-type ATPase n=1 Tax=Nitratireductor indicus C115 RepID=K2N4I1_9RHIZ
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKF42293.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCN18_10_11_15_R4_B_scaffold_557_30
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27402..28637)
DNA (1236bp) protein (412aa)
Chromate transport protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWS9_9RHIZ
Chromate transport protein {ECO:0000313|EMBL:EKF42294.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
chromate transporter
Displaying items 1-30 of 39 in total

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