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SCN18_10_11_15_R4_B_scaffold_862

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_862_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14..640)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2J6U5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGD96820.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Bile tolerance locus B
SCN18_10_11_15_R4_B_scaffold_862_2
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(686..2191)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3C441_9RHIZ
Possible TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family
Uncharacterized protein {ECO:0000313|EMBL:EUB99753.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
SCN18_10_11_15_R4_B_scaffold_862_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2210..2734)
DNA (525bp) protein (175aa)
Tripartite tricarboxylate transporter TctB family n=1 Tax=Rhizobium sp. CF080 RepID=J2JS12_9RHIZ
Tripartite tricarboxylate transporter TctB family
Tripartite tricarboxylate transporter TctB family {ECO:0000313|EMBL:CDN52264.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_10_11_15_R4_B_scaffold_862_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2886..3908)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036A4D79
NAD(P)H-quinone oxidoreductase {ECO:0000313|EMBL:KGD96826.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
NAD(P)H quinone oxidoreductase, PIG3 family
SCN18_10_11_15_R4_B_scaffold_862_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3905..4666)
DNA (762bp) protein (254aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhizobium sp. CF080 RepID=J3C3X6_9RHIZ
Short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDN58248.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_10_11_15_R4_B_scaffold_862_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4754..5527)
DNA (774bp) protein (258aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Rhizobium sp. CF080 RepID=J2IRZ9_9RHIZ
HpcH/HpaI aldolase {ECO:0000313|EMBL:EUB99757.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
HpcH/HpaI aldolase/citrate lyase family protein
SCN18_10_11_15_R4_B_scaffold_862_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5738..6631
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2JS16_9RHIZ
NADPH:quinone reductase {ECO:0000313|EMBL:KGD96824.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
PF05853 family protein
SCN18_10_11_15_R4_B_scaffold_862_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6673..7584
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2SEH0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB99750.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Hypothetical protein
SCN18_10_11_15_R4_B_scaffold_862_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7688..8635)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2KBS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB99759.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Hypothetical protein
SCN18_10_11_15_R4_B_scaffold_862_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8752..9567
DNA (816bp) protein (272aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3CFH5_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KGD96828.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
mhpR; DNA-binding transcriptional activator MhpR
SCN18_10_11_15_R4_B_scaffold_862_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9623..10984)
DNA (1362bp) protein (454aa)
4-aminobutyrate aminotransferase n=1 Tax=Pseudomonas tolaasii RepID=UPI000304F6F3
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:KFI26886.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
4-aminobutyrate aminotransferase
SCN18_10_11_15_R4_B_scaffold_862_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10986..12065)
DNA (1080bp) protein (360aa)
Aminoglycoside phosphotransferase domain-containing protein (EC:2.7.1.39)
Putative aminoglycoside phosphotransferase n=1 Tax=Ralstonia syzygii R24 RepID=G3A907_9RALS
Putative homoserine kinase type II {ECO:0000313|EMBL:CCH76951.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
SCN18_10_11_15_R4_B_scaffold_862_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12292..13026)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003636EBD
Uncharacterized protein {ECO:0000313|EMBL:KFL27968.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
GntR family transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_862_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13280..14464)
DNA (1185bp) protein (395aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL31050.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_862_15
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14694..15923
DNA (1230bp) protein (410aa)
dpaL; diaminopropionate ammonia-lyase (EC:4.3.1.15)
Diaminopropionate ammonia-lyase n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HK52_ACHXA
Tax=BJP_IG2103_Rhodocyclales_63_50
SCN18_10_11_15_R4_B_scaffold_862_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15983..17032)
DNA (1050bp) protein (350aa)
Aminoglycoside phosphotransferase domain-containing protein (EC:2.7.1.39)
Putative aminoglycoside phosphotransferase n=1 Tax=Ralstonia syzygii R24 RepID=G3A907_9RALS
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:CCA87748.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
SCN18_10_11_15_R4_B_scaffold_862_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17299..18147)
DNA (849bp) protein (283aa)
Transcriptional regulator, GntR family n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KHM5_PSEPG
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABY99107.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
SCN18_10_11_15_R4_B_scaffold_862_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18144..19040)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378316B
Uncharacterized protein {ECO:0000313|EMBL:CDP51216.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Glycerol-3-phosphate ABC transporter, permease protein
SCN18_10_11_15_R4_B_scaffold_862_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19045..19962)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000376A463
N-Acetyl-D-glucosamine ABC transport system, perme ase protein 1 {ECO:0000313|EMBL:CDP51215.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
sugar ABC transporter permease
SCN18_10_11_15_R4_B_scaffold_862_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20024..21505)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D5036
Uncharacterized protein {ECO:0000313|EMBL:KFL27973.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
msmE; Substrate-binding protein MsmE
SCN18_10_11_15_R4_B_scaffold_862_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21609..22706)
DNA (1098bp) protein (366aa)
ABC transporter ATP-binding protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HSR1_AZOC5
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAF90206.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_10_11_15_R4_B_scaffold_862_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22758..23225)
DNA (468bp) protein (156aa)
endoribonuclease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000348FF77
Endoribonuclease {ECO:0000313|EMBL:KJC58814.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
endoribonuclease L-PSP
SCN18_10_11_15_R4_B_scaffold_862_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23353..24303
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C3B23
Uncharacterized protein {ECO:0000313|EMBL:CDP51221.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_862_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24396..25244)
DNA (849bp) protein (283aa)
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. StFLB209.;"
Probable D-serine dehydratase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z1J7_PARAH
D-serine dehydratase
Displaying 24 items

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