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SCN18_10_11_15_R4_B_scaffold_2363

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_2363_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..161)
DNA (159bp) protein (53aa)
SCN18_10_11_15_R4_B_scaffold_2363_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(273..1013)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EA010E
GntR domain protein
GntR domain protein {ECO:0000313|EMBL:CDN55651.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_10_11_15_R4_B_scaffold_2363_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1153..2547
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EF0FE5
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ESZ09833.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
FAD-dependent oxidoreductase
SCN18_10_11_15_R4_B_scaffold_2363_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2558..6028
DNA (3471bp) protein (1157aa)
Putative pyruvate ferredoxin oxidoreductase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5FAF8_9RHIZ
Putative pyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:CCV08881.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Indolepyruvate ferredoxin oxidoreductase
SCN18_10_11_15_R4_B_scaffold_2363_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6093..8183)
DNA (2091bp) protein (697aa)
Putative pimeloyl-CoA synthetase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7H7_9RHIZ
Putative pimeloyl-CoA synthetase {ECO:0000313|EMBL:CCV12148.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Acyl-CoA synthetase (NDP forming)
SCN18_10_11_15_R4_B_scaffold_2363_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8191..9012)
DNA (822bp) protein (274aa)
Putative enoyl-CoA hydratase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F4A6_9RHIZ
Putative enoyl-CoA hydratase {ECO:0000313|EMBL:CCV12147.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
3-hydroxybutyryl-CoA dehydratase
SCN18_10_11_15_R4_B_scaffold_2363_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9042..9965)
DNA (924bp) protein (308aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EY10_9RHIZ
Pseudouridine-5'-phosphate glycosidase
SCN18_10_11_15_R4_B_scaffold_2363_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9962..11071)
DNA (1110bp) protein (370aa)
Putative kinase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXJ1_9RHIZ
Putative kinase {ECO:0000313|EMBL:CCV08877.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Carbohydrate kinase, PfkB family
SCN18_10_11_15_R4_B_scaffold_2363_9
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11386..12345
DNA (960bp) protein (320aa)
Putative Fe-containing oxidoreductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FJ15_9RHIZ
Putative Fe-containing oxidoreductase {ECO:0000313|EMBL:CCV12144.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
2OG-Fe(II) oxygenase
SCN18_10_11_15_R4_B_scaffold_2363_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12454..13491
DNA (1038bp) protein (346aa)
Putative substrate-binding component of ABC transporter n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EY56_9RHIZ
Putative substrate-binding component of ABC transporter {ECO:0000313|EMBL:CCV08875.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter substrate-binding protein
SCN18_10_11_15_R4_B_scaffold_2363_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13639..14697
DNA (1059bp) protein (353aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Polyamine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV83_9RHIZ
ABC transporter
SCN18_10_11_15_R4_B_scaffold_2363_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14694..15584
DNA (891bp) protein (297aa)
Putative permease component of ABC transporter n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F764_9RHIZ
Putative permease component of ABC transporter {ECO:0000313|EMBL:CCV12141.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
ABC-type spermidine/putrescine transport system, permease component I
SCN18_10_11_15_R4_B_scaffold_2363_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15581..16363
DNA (783bp) protein (261aa)
Putative permease component of ABC transporter n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXI9_9RHIZ
Putative permease component of ABC transporter {ECO:0000313|EMBL:CCV08872.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter permease
SCN18_10_11_15_R4_B_scaffold_2363_14
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16512..16913
DNA (402bp) protein (134aa)
Putative attachment-related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NK75_9RHIZ
Putative attachment-related protein {ECO:0000313|EMBL:EKF39850.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative attachment-related protein
SCN18_10_11_15_R4_B_scaffold_2363_trna_1
unknown

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comp(17007..17079)
DNA (73bp)
transferRNA Phe
SCN18_10_11_15_R4_B_scaffold_2363_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17273..17482)
DNA (210bp) protein (70aa)
UPI0003CFDE06 related cluster n=1 Tax=unknown RepID=UPI0003CFDE06
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
zinc-binding protein
SCN18_10_11_15_R4_B_scaffold_2363_16
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17486..17641)
DNA (156bp) protein (52aa)
Maf-like protein A33O_12954 n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BXI2_9RHIZ
Maf-like protein A33O_12954 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
MAF protein
Displaying 17 items

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