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SCN18_10_11_15_R4_B_scaffold_3180

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_3180_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21..602)
DNA (582bp) protein (194aa)
SCN18_10_11_15_R4_B_scaffold_3180_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(550..1812)
DNA (1263bp) protein (421aa)
Site-specific recombinase, phage integrase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAJ4_9RHOB
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EAQ14935.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
phage integrase family site specific recombinase
SCN18_10_11_15_R4_B_scaffold_3180_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1892..4090)
DNA (2199bp) protein (733aa)
XRE family transcriptional regulator n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AB22_RHIRD
XRE family transcriptional regulator {ECO:0000313|EMBL:EMS95488.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
XRE family transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_3180_4
unknown

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4416..4925
DNA (510bp) protein (170aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_3180_5
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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5144..5980
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Leptospira licerasiae serovar Varillal str. VAR 010 RepID=I0XQQ9_9LEPT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
SCN18_10_11_15_R4_B_scaffold_3180_6
SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6341..6490)
DNA (150bp) protein (50aa)
DNA methyltransferase n=1 Tax=Teredinibacter turnerae RepID=UPI000368F5A8
site-specific DNA-methyltransferase (Adenine-specific)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:AFT71377.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
SCN18_10_11_15_R4_B_scaffold_3180_7
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6483..6836)
DNA (354bp) protein (118aa)
Regulatory protein GntR HTH n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVB3_FRASU
GntR family transcriptional regulator
Regulatory protein GntR HTH {ECO:0000313|EMBL:ADP81277.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
Displaying 7 items

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