ggKbase home page

SCN18_10_11_15_R4_B_scaffold_287_13

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(11318..12007)

Top 3 Functional Annotations

Value Algorithm Source
Fnr-type transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLQ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 228.0
  • Bit_score: 332
  • Evalue 2.50e-88
Transcriptional regulator {ECO:0000313|EMBL:EZQ15839.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 229.0
  • Bit_score: 370
  • Evalue 1.50e-99
cAMP-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 228.0
  • Bit_score: 331
  • Evalue 1.60e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGCTGTGCGCCTCCTGCGAGGCGCGCCATGGGGGCGTTTGCGCCGCGCTCGACCCTGACCAGCTCGCCGTGCTGGCGAGGAGCGCCCGCAAATACGAGGCTGGAAGCGGCACCGAGCTCATGGGCGACGCCGAGCGGATCGAGTCCTACGCCAACGTGCTGTCGGGCGTGGTGAAGCTGACCAAGACGCTGTCCGACGGCCGCCAGCAGATCGTCGGCCTGCAGTTCGCGCCGGACTTCCTCGGCCGGCCGTTCAAGGCCGAGAGCGACCTCAACGCCGAAGCCGCCACCGACGTCTCGCTGTGCGCCTTCCCGCGCGCCTCGGTGGAGCGCATGATACGGGCCTCGCCCGAGCTGGAACGCCGGCTCTACCTGCAGGCTCTCAAGGAGCTCGACGAGGCGCGCGACTGGATGGTGACGCTGGGCCGCAAGACGGCCGGCGAGAAAATTGCCTCCTTCCTGCTGATGATCGCGCGCAGCATCGAGCCGGCCGCCGGAACGGACCGCATGTCCGCGCGATTCGACCTGCCGCTGACGCGCGCCGACATCGCCGACTTCCTCGGCCTCACCATCGAGACGGTGAGCCGGCAACTGACCCGGCTGCGGGCCGACAAGGTCATCGCCATCGAGAACAACCGGCACGTCATCGTGCCGGACCTGAGCCGCCTGGAGGCCCGGCAGGGCAGGTAG
PROTEIN sequence
Length: 230
VLCASCEARHGGVCAALDPDQLAVLARSARKYEAGSGTELMGDAERIESYANVLSGVVKLTKTLSDGRQQIVGLQFAPDFLGRPFKAESDLNAEAATDVSLCAFPRASVERMIRASPELERRLYLQALKELDEARDWMVTLGRKTAGEKIASFLLMIARSIEPAAGTDRMSARFDLPLTRADIADFLGLTIETVSRQLTRLRADKVIAIENNRHVIVPDLSRLEARQGR*