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SCN18_10_11_15_R4_B_scaffold_287

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_287_1
unknown

Not on your lists

comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

SCN18_10_11_15_R4_B_scaffold_287_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54..1106)
DNA (1053bp) protein (351aa)
ABC di/oligopeptide transporter, ATPase subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N376_9RHIZ
ABC di/oligopeptide transporter, ATPase subunit {ECO:0000313|EMBL:EKF18633.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC di/oligopeptide transporter, ATPase subunit
SCN18_10_11_15_R4_B_scaffold_287_3
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1364..2545
DNA (1182bp) protein (394aa)
Diguanylate cyclase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QV62_METTR
Uncharacterized protein {ECO:0000313|EMBL:GAO56652.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
diguanylate cyclase
SCN18_10_11_15_R4_B_scaffold_287_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2542..2721)
DNA (180bp) protein (60aa)
Nitrogen fixation protein fixS n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EE81_9RHIZ
Cytochrome oxidase maturation protein Cbb3 {ECO:0000313|EMBL:EXL06715.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cytochrome oxidase maturation protein, cbb3-type
SCN18_10_11_15_R4_B_scaffold_287_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2718..4952)
DNA (2235bp) protein (745aa)
UPI0003D028CE related cluster n=1 Tax=unknown RepID=UPI0003D028CE
Nitrogen fixation protein FixI {ECO:0000313|EMBL:EXL06716.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
nitrogen fixation protein fixI
SCN18_10_11_15_R4_B_scaffold_287_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4949..5440)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000304EBA6
Cytochrome oxidase {ECO:0000313|EMBL:EZQ15846.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
fixh family protein
SCN18_10_11_15_R4_B_scaffold_287_7
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5445..7001)
DNA (1557bp) protein (519aa)
nitrogen fixation protein fixG n=1 Tax=Rhizobium loti RepID=UPI00036D7843
Nitrogen fixation protein FixG {ECO:0000313|EMBL:EZQ15845.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
nitrogen fixation protein fixG
SCN18_10_11_15_R4_B_scaffold_287_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7225..8079)
DNA (855bp) protein (285aa)
cytochrome CBB3 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003719D18
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cytochrome-c oxidase subunit FixP
SCN18_10_11_15_R4_B_scaffold_287_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8081..8233)
DNA (153bp) protein (51aa)
FixQ1 nitrogen fixation protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E9C9A6
Nitrogen fixation protein FixQ {ECO:0000313|EMBL:EZQ15843.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ccoQ1; cbb3-type cytochrome oxidase, subunit CcoQ
SCN18_10_11_15_R4_B_scaffold_287_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8243..8974)
DNA (732bp) protein (244aa)
fixO2; FixO2 cytochrome c oxidase subunit (EC:1.9.3.1)
Cytochrome c oxidase subunit FixO n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D520_9RHIZ
Peptidase S41 {ECO:0000313|EMBL:EZQ15842.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCN18_10_11_15_R4_B_scaffold_287_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8987..10609)
DNA (1623bp) protein (541aa)
Cytochrome-c oxidase FixN chain n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988R2_RHILO
Peptidase S41 {ECO:0000313|EMBL:EXL06722.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cbb3-type cytochrome C oxidase subunit I
SCN18_10_11_15_R4_B_scaffold_287_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10783..11277
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y065_MESOW
Uncharacterized protein {ECO:0000313|EMBL:EXL06723.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_287_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11318..12007)
DNA (690bp) protein (230aa)
Fnr-type transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YLQ7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EZQ15839.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cAMP-binding protein
SCN18_10_11_15_R4_B_scaffold_287_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12241..12978)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037DA756
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA23580.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
SCN18_10_11_15_R4_B_scaffold_287_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13044..13508)
DNA (465bp) protein (155aa)
L-PSP family endoribonuclease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036AC7F3
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ADG83103.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
SCN18_10_11_15_R4_B_scaffold_287_16
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13514..14587)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003654457
Cysteine desulfurase {ECO:0000313|EMBL:EXJ14282.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
selenocysteine lyase
SCN18_10_11_15_R4_B_scaffold_287_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14587..15717)
DNA (1131bp) protein (377aa)
amino acid ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036CBDB0
ABC transporter, permease protein {ECO:0000313|EMBL:EFH12249.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_10_11_15_R4_B_scaffold_287_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15714..16883)
DNA (1170bp) protein (390aa)
amino acid ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036C1942
ABC transporter permease {ECO:0000313|EMBL:ETF01459.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
Glutamate Aspartate transport system permease protein GltJ
SCN18_10_11_15_R4_B_scaffold_287_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16952..17983)
DNA (1032bp) protein (344aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000361EE5F
Lysine-arginine-ornithine-binding periplasmic protein {ECO:0000313|EMBL:EFH09324.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
family 3 extracellular solute-binding protein
SCN18_10_11_15_R4_B_scaffold_287_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18093..19193)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000381B0F8
NnrS
NnrS {ECO:0000313|EMBL:ABG61259.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_287_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19213..20721)
DNA (1509bp) protein (503aa)
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABG61263.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABG61263.1};; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV6_MESSB
SCN18_10_11_15_R4_B_scaffold_287_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20800..21396
DNA (597bp) protein (199aa)
Putative lipid carrier protein-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV4_MESSB
putative lipid carrier protein-like
Putative lipid carrier protein-like protein {ECO:0000313|EMBL:ABG61265.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_287_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21393..22397
DNA (1005bp) protein (335aa)
Peptidase U32 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV3_MESSB
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ABG61266.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_287_24
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22402..23304
DNA (903bp) protein (301aa)
Peptidase U32 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV2_MESSB
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ABG61267.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_287_25
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23347..23700
DNA (354bp) protein (118aa)
Membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JE26_OLICO
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI06230.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_10_11_15_R4_B_scaffold_287_26
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23705..24448)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003650936
Uncharacterized protein {ECO:0000313|EMBL:KKN61744.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cyclic nucleotide-binding protein
SCN18_10_11_15_R4_B_scaffold_287_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24617..24781
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QB36_9RHOB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCN18_10_11_15_R4_B_scaffold_287_28
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24800..25336
DNA (537bp) protein (179aa)
Cytochrome c oxidase (B(O/a)3-type) chain II n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QC57_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN61729.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Heme/copper-type cytochrome/quinol oxidase, subunit 2
SCN18_10_11_15_R4_B_scaffold_287_29
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25350..27074
DNA (1725bp) protein (575aa)
Cytochrome c oxidase (B(O/a)3-type) chain I n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RTA5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN61728.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome c oxidase subunit I
SCN18_10_11_15_R4_B_scaffold_287_30
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27097..27960
DNA (864bp) protein (288aa)
Protoheme IX farnesyltransferase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RGG0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN61727.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
polyprenyltransferase
Displaying items 1-30 of 59 in total

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