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SCN18_10_11_15_R4_B_scaffold_1036_12

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(9399..10049)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. CF142 RepID=J1T0Y1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 216.0
  • Bit_score: 317
  • Evalue 5.90e-84
Amino acid ABC transporter permease {ECO:0000313|EMBL:KGM33311.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 217.0
  • Bit_score: 327
  • Evalue 8.00e-87
polar amino acid ABC transporter inner membrane subunit similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 216.0
  • Bit_score: 317
  • Evalue 2.90e-84

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGGGCGGGCTGAGCCTCAACTACTTCCTCTACCTGCTGCAGGGCATGGGCTGGACCGTGGCGCTCACCCTGCTCGCCTTCGCGCTGGGCGGGCTCGCCGGCTTCCTCGTCATGCTGGCGCGCATCTCGCCGGTTCCCGCGGTGAGCCGCGCCACGGCGGCCTACGTGCAGGTGATCCAGGGCATCCCCGTGCTGGTCATCCTGTTCATCGTCTATTTCGGCCTCGGCATCCTCGAGATCGACGTGCCGCCGCTGGTGGCGGCCGGCCTGTCGCTGACGGCCTACACCAGCGCCTTCCTCGGCGAGATCTGGCGCGGCGCGGTGGAGGCGGTGCCGCGCACGCAGATGGAGGCGGCCGAGTGCCTGGCGCTCACCCGCTGGCAGGCCCTGCGCGACGTCATCCTGCCGCAGGCCGTGCGCATCGCCACGCCGCCCACCGTCGGCTTCCTGGTGCAGGTGCTCAAGAGCACGTCGCTCGCCTCCGTTGTCGGCTTCGTCGAGCTCACCCGCGCCGCCCAGGTCATCAACAACTCGACCTTCCAGCCGTTCCTCATCTTCGGCACGGCGGGCCTAATGTACTTCGTGCTCTGCTACCCGCTGTCGCTGTGGAGCCGCACCCTCGAGAGGAGGCTCAATGTCGGCCGTCGTTAG
PROTEIN sequence
Length: 217
MGGLSLNYFLYLLQGMGWTVALTLLAFALGGLAGFLVMLARISPVPAVSRATAAYVQVIQGIPVLVILFIVYFGLGILEIDVPPLVAAGLSLTAYTSAFLGEIWRGAVEAVPRTQMEAAECLALTRWQALRDVILPQAVRIATPPTVGFLVQVLKSTSLASVVGFVELTRAAQVINNSTFQPFLIFGTAGLMYFVLCYPLSLWSRTLERRLNVGRR*