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SCN18_10_11_15_R4_B_scaffold_1036

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_1036_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85..498
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FA81_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX29252.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glutathione-dependent formaldehyde-activating GFA
SCN18_10_11_15_R4_B_scaffold_1036_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(511..1008)
DNA (498bp) protein (166aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010603}; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010679};; Xanthine-guanine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MU78_9RHIZ
SCN18_10_11_15_R4_B_scaffold_1036_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1108..1944)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C7G0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM77762.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1036_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2132..3124
DNA (993bp) protein (331aa)
Acyltransferase 3 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CZW7_VARPS
Variovorax paradoxus strain MEDvA23 contig_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27924.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
acyltransferase 3
SCN18_10_11_15_R4_B_scaffold_1036_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3134..4357)
DNA (1224bp) protein (408aa)
Monooxygenase FAD-binding n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXZ3_PARL1
hypothetical protein
Monooxygenase FAD-binding {ECO:0000313|EMBL:ABS64776.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_10_11_15_R4_B_scaffold_1036_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4354..5097)
DNA (744bp) protein (248aa)
molybdenum cofactor biosynthesis protein n=1 Tax=Rhizobium loti RepID=UPI000360D455
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:CDX11630.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative nuleotide-utilizing enzyme, moeA
SCN18_10_11_15_R4_B_scaffold_1036_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5190..6254
DNA (1065bp) protein (355aa)
Lactone-specific esterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRX3_9RHIZ
Lactone-specific esterase {ECO:0000313|EMBL:EHK56528.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
alpha/beta hydrolase fold protein
SCN18_10_11_15_R4_B_scaffold_1036_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6310..6693)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXV9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54435.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
unnamed protein product
SCN18_10_11_15_R4_B_scaffold_1036_trna_1
unknown

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6909..6991
DNA (83bp)
transferRNA Leu
SCN18_10_11_15_R4_B_scaffold_1036_9
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7017..7787)
DNA (771bp) protein (257aa)
2-deoxy-D-gluconate 3-dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHN5_9RHIZ
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KKB13411.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
2-deoxy-D-gluconate 3-dehydrogenase
SCN18_10_11_15_R4_B_scaffold_1036_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7846..8640)
DNA (795bp) protein (265aa)
amino acid ABC transporter n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003644C86
Amino acid ABC transporter {ECO:0000313|EMBL:KGM33313.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
extracellular solute-binding protein
SCN18_10_11_15_R4_B_scaffold_1036_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8687..9415)
DNA (729bp) protein (243aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ68_METS4
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACA16199.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_10_11_15_R4_B_scaffold_1036_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9399..10049)
DNA (651bp) protein (217aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. CF142 RepID=J1T0Y1_9RHIZ
Amino acid ABC transporter permease {ECO:0000313|EMBL:KGM33311.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
polar amino acid ABC transporter inner membrane subunit
SCN18_10_11_15_R4_B_scaffold_1036_13
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10057..10740)
DNA (684bp) protein (228aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ70_METS4
polar amino acid ABC transporter inner membrane subunit
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACA16201.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_10_11_15_R4_B_scaffold_1036_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10737..11573)
DNA (837bp) protein (279aa)
kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
5-keto-4-deoxyuronate isomerase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D000C
SCN18_10_11_15_R4_B_scaffold_1036_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11563..12327)
DNA (765bp) protein (255aa)
HTH-type transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P5M0_AZOS1
GntR family transcriptional regulator {ECO:0000313|EMBL:KGM33316.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
HTH-type transcriptional regulator
SCN18_10_11_15_R4_B_scaffold_1036_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12499..14310
DNA (1812bp) protein (604aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
adenine deaminase n=1 Tax=Rhizobium loti RepID=UPI00037B7E0B
adenine deaminase
SCN18_10_11_15_R4_B_scaffold_1036_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14351..14893
DNA (543bp) protein (181aa)
SCN18_10_11_15_R4_B_scaffold_1036_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14904..16055)
DNA (1152bp) protein (384aa)
UPI0003CF294A related cluster n=1 Tax=unknown RepID=UPI0003CF294A
Uncharacterized protein {ECO:0000313|EMBL:ESW92840.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1036_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16122..17579)
DNA (1458bp) protein (486aa)
Trk system potassium uptake protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2NA28_9RHIZ
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
cation transporter
SCN18_10_11_15_R4_B_scaffold_1036_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17735..18268
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55154.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_1036_21
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18600..20135
DNA (1536bp) protein (512aa)
RNA helicase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003768325
RNA helicase {ECO:0000313|EMBL:EZQ13828.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
DEAD/DEAH box helicase
SCN18_10_11_15_R4_B_scaffold_1036_22
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20218..20739)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F2C674
Uncharacterized protein {ECO:0000313|EMBL:EXL01402.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
CinA domain-containing protein
SCN18_10_11_15_R4_B_scaffold_1036_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20736..21494)
DNA (759bp) protein (253aa)
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FSN2_9RHIZ
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Displaying 24 items

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