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SCN18_10_11_15_R4_B_scaffold_914_16

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 14040..15524

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF2D80 related cluster n=1 Tax=unknown RepID=UPI0003CF2D80 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 508.0
  • Bit_score: 689
  • Evalue 1.70e-195
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 509.0
  • Bit_score: 700
  • Evalue 1.00e-198
RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 508.0
  • Bit_score: 679
  • Evalue 3.90e-193

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGGCTCTGTCGGCCAAACTCCAGCTCCGCCAGTCGCAGTCGCTGGTGATGACGCCGCAGCTCATGCAGTCGATCCGGCTGCTGCAGCTCGGCCATGCGGAGCTGGAACGGTTCATCGACGCCGAGATCGAGAAGAACCCGCTGCTGGAGCGCATCGGCGACGATGCCCCTGCGGCAGCGGACGCGCCCGCCGGCGACGAGGCGGGCGACTGGAGCGCGCAGGCGATGTCGGACCGGCTCGACACGTCGCTGGAGAACGTCTTTCCCGACGATCCCGGCCGCAACGACGCGATCGCGCCAGATCTCGCCGCACAGTGGAAATCGGCCCCGGCCAGCAGGGCGACGGGCGGCGGCGAGGCGCCCGACCTCGAGGCGACGGCCGCCGCGCCCGTGACGCTCGCCGACCACCTCGCCGGGCAGATCGCGCTCACCTTCGCCGACCCGGCCGACCGGCTTATCGCGGGCGAACTCGCCGGGACGCTGAGCGATGCCGGCTATCTGGAGGCGGACACGGCAGAGCTGGCGGCGCGGCTCGGGGTCACGCCGGAGCGGGTGGAGGCGGTGCTGGCGCGCTGCCAGACGCTGGATCCCGCCGGCGTCTTCGCACGCGACCTCGCCGAATGCCTGGCGCTGCAGCTCGCGGCACGCGACCGGCTGGACCCGGCCATGGCCGCGCTGGTCGGCCATCTCGACCTGCTGGCGCGGCGCGACTTCGCGGCGCTGCGGCGCATCTGCGGGGTCGACGACGAGGATCTGGTCGACATGCTGGCCGAGATCCGCACGCTCGACCCCAAGCCGGGCGCGGGCTTCGCCTCGGGAACGGCCGATCCGGTGGTGCCGGACGTGCTCGTCTCGCCCGCCCCGGACGGGAGCTGGGCCGTCGAGCTCAATTCCGACACGCTGCCGCGCGTGCTGGTCGACCAAGCCTACCACGCCCGCATCGCCGGGGCGGCGCGGGACGCGGCCGAGCGGGAATTCCTCAGCGAATGCCTGCAGAACGCCAACTGGCTGACGCGCAGCCTCGACCAGCGCGCCCGCACCATCCTCAAGGTGGCCGGCGAGATCGTGCGCCAGCAGGACGCCTTCCTGACCCACGGCATCCGCCACCTGAAGCCGCTCAACCTGCGCACGGTGGCGGACGCCATCGGCATGCACGAATCGACCGTCAGCCGGGTGACGGCCAACAAATACATGCTGACGCCGCGCGGCGTGTTCGAGCTGCGCTTCTTCTTCACCGCCGCCATCGCCTCGGCGGAAGGCGGCGAGGCGCATTCGGCCGAGGCCGTGCGCGACCGCATCCGCGAGCTGATCGAGGGCGAGAAGCCGGTCGACGTGCTGTCCGACGACACCATTGTGGATATCCTGAGGAAAAGCGGCGTCGACATCGCCCGGCGCACGGTGGCCAAGTACCGCGAGGGCATGAACATTCCCTCGTCGGTGCAGCGGCGGCGCGAGAAGCGGGCGCTGATGGCGGCGAGCCGCTGA
PROTEIN sequence
Length: 495
MALSAKLQLRQSQSLVMTPQLMQSIRLLQLGHAELERFIDAEIEKNPLLERIGDDAPAAADAPAGDEAGDWSAQAMSDRLDTSLENVFPDDPGRNDAIAPDLAAQWKSAPASRATGGGEAPDLEATAAAPVTLADHLAGQIALTFADPADRLIAGELAGTLSDAGYLEADTAELAARLGVTPERVEAVLARCQTLDPAGVFARDLAECLALQLAARDRLDPAMAALVGHLDLLARRDFAALRRICGVDDEDLVDMLAEIRTLDPKPGAGFASGTADPVVPDVLVSPAPDGSWAVELNSDTLPRVLVDQAYHARIAGAARDAAEREFLSECLQNANWLTRSLDQRARTILKVAGEIVRQQDAFLTHGIRHLKPLNLRTVADAIGMHESTVSRVTANKYMLTPRGVFELRFFFTAAIASAEGGEAHSAEAVRDRIRELIEGEKPVDVLSDDTIVDILRKSGVDIARRTVAKYREGMNIPSSVQRRREKRALMAASR*