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SCN18_10_11_15_R4_B_scaffold_914

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_914_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..156
DNA (156bp) protein (52aa)
aldehyde dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003671807
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABG64996.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_914_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272..2419
DNA (2148bp) protein (716aa)
UPI0003CDECFB related cluster n=1 Tax=unknown RepID=UPI0003CDECFB
Phospholipase {ECO:0000313|EMBL:ESX72595.1}; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
phospholipase D/transphosphatidylase
SCN18_10_11_15_R4_B_scaffold_914_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2430..4724)
DNA (2295bp) protein (765aa)
Two-component sensor/response regulator hybrid n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIZ7_9RHIZ
Two-component sensor/response regulator hybrid {ECO:0000313|EMBL:EHK59292.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
two-component sensor/response regulator hybrid
SCN18_10_11_15_R4_B_scaffold_914_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4805..5794)
DNA (990bp) protein (330aa)
Alcohol dehydrogenase GroES-like protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C121_9RHIZ
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:EIM75523.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
YhdH/YhfP family quinone oxidoreductase
SCN18_10_11_15_R4_B_scaffold_914_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5866..6354)
DNA (489bp) protein (163aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Lipoprotein signal peptidase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TCP3_MESCW
lipoprotein signal peptidase
SCN18_10_11_15_R4_B_scaffold_914_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6354..7202)
DNA (849bp) protein (283aa)
RNA methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F365EF
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase {ECO:0000313|EMBL:CDX32605.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCN18_10_11_15_R4_B_scaffold_914_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7199..8242)
DNA (1044bp) protein (348aa)
SAM-dependent methlyltransferase n=1 Tax=Rhizobium loti RepID=UPI0003605991
SAM dependent methyltransferase {ECO:0000313|EMBL:AID32508.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SAM dependent methyltransferase
SCN18_10_11_15_R4_B_scaffold_914_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8286..8825)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11C32_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65043.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_914_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8854..9828)
DNA (975bp) protein (325aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ESW89888.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ESW89888.1};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
UPI0003CEF19A related cluster n=1 Tax=unknown RepID=UPI0003CEF19A
putative ornithine cyclodeaminase, mu-crystallin
SCN18_10_11_15_R4_B_scaffold_914_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9853..10176)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MRW1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20067.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_914_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10224..10508)
DNA (285bp) protein (95aa)
UPI0003CF91E3 related cluster n=1 Tax=unknown RepID=UPI0003CF91E3
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
integration host factor subunit beta
SCN18_10_11_15_R4_B_scaffold_914_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10576..11544)
DNA (969bp) protein (323aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGX4_MESAW
signal peptide peptidase SppA, 36K type
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:AGB44256.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_10_11_15_R4_B_scaffold_914_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11772..12524
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DBC08F
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59281.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_914_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12532..13083
DNA (552bp) protein (184aa)
OstA-like protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N9W7_9RHIZ
OstA-like protein {ECO:0000313|EMBL:EKF44408.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_914_15
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13083..13892
DNA (810bp) protein (270aa)
ABC transporter related protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11C39_MESSB
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABG65036.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_10_11_15_R4_B_scaffold_914_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14040..15524
DNA (1485bp) protein (495aa)
UPI0003CF2D80 related cluster n=1 Tax=unknown RepID=UPI0003CF2D80
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
RNA polymerase sigma-54 factor RpoN
SCN18_10_11_15_R4_B_scaffold_914_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15757..16338
DNA (582bp) protein (194aa)
Sigma-54 modulation protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C110_9RHIZ
Sigma-54 modulation protein {ECO:0000313|EMBL:EIM75512.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
sigma-54 modulation protein
SCN18_10_11_15_R4_B_scaffold_914_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16401..16865
DNA (465bp) protein (155aa)
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Nitratireductor indicus C115 RepID=K2P2S1_9RHIZ
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EKF44404.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
SCN18_10_11_15_R4_B_scaffold_914_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16924..17181)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C107_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM75509.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_914_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17257..17682)
DNA (426bp) protein (142aa)
Heat shock protein Hsp20 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4T9_9RHIZ
Heat-shock protein Hsp20 {ECO:0000313|EMBL:EXL09646.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
heat shock protein Hsp20
SCN18_10_11_15_R4_B_scaffold_914_21
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17795..18733
DNA (939bp) protein (313aa)
Ribonucleoside hydrolase 1 {ECO:0000313|EMBL:CDX32548.1}; EC=3.2.2.- {ECO:0000313|EMBL:CDX32548.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
PREDICTED: uncharacterized protein C1683.06c-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C193BA
Inosine-uridine nucleoside N-ribohydrolase
SCN18_10_11_15_R4_B_scaffold_914_22
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18749..19519)
DNA (771bp) protein (257aa)
Fe-ABC transporter, ATP-binding subunit, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q165X4_ROSDO
Fe-ABC transporter ATP-binding subunit
Fe-ABC transporter, ATP-binding subunit, putative {ECO:0000313|EMBL:ABG32219.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter; sp. (strain OCh 114)) (Roseobacter denitrificans).;"
SCN18_10_11_15_R4_B_scaffold_914_23
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19516..20574)
DNA (1059bp) protein (353aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E468_9GAMM
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EGV29795.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
iron ABC transporter
SCN18_10_11_15_R4_B_scaffold_914_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20628..21794)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GFM6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ43274.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
ABC transporter, periplasmic binding protein
SCN18_10_11_15_R4_B_scaffold_914_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21812..22636)
DNA (825bp) protein (275aa)
Methyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1K5_9RHIZ
Methyltransferase {ECO:0000313|EMBL:EYR82206.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SAM-dependent methyltransferase protein
SCN18_10_11_15_R4_B_scaffold_914_26
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22871..23866
DNA (996bp) protein (332aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EB424E
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:EKF41280.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
family 1 extracellular solute-binding protein
SCN18_10_11_15_R4_B_scaffold_914_27
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23880..24140
DNA (261bp) protein (87aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NTX3_9RHIZ
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EKF41279.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
binding-protein-dependent transport system inner membrane protein
Displaying 27 items

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