ggKbase home page

SCN18_10_11_15_R4_B_scaffold_1235_15

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(18225..18911)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003694402 similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 229.0
  • Bit_score: 315
  • Evalue 2.40e-83
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KCV67049.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 233.0
  • Bit_score: 303
  • Evalue 2.20e-79
branched chain amino acid ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 233.0
  • Bit_score: 302
  • Evalue 5.90e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGACGCCTGACGCCTCGCTCCAGGTGCGCGACCTCCACGGCTGGTACGGCGAGAGCAAGGCGCTGCACGGCATGAACTTCGAGATCGGTCGCGGCGAGGTGGTGACGCTGCTCGGCCGCAACGGCGCCGGCAAGACGACCACGCTGCGCGCCATCATGGGCCTGCTGCGCAAAAAGACCGGCGAGATCCGCTTCCGCGGCGAGGAGCTTTGCGGCCGGCTGCCGGAATATGTCGCGCGGCGCGGCATCGCCATCTTCTCCAGCCTGACGGTGGAGGAGAACCTGATGCTGCCGCCGGTGGTGGCCGAGGGCGGCATGGCGATGGACGACATACTGGCGCTGTTCCCCAACCTCGCCGAGCGGCGCAACAGCCCAGGCACCAAGCTTTCCGGCGGCGAGCAGCAGATGCTGGCGATCGCGCGCATCCTGCGCACCGGCGCCACCCTGCTGCTGCTCGACGAGCCGACTGAGGGGCTGGCGCCGGTGATCGTCAAGCAGATCGGCGCCGTCATCGCCAAGCTCAAGGAGCGCGGCTTCACCGTGCTGCTGGTCGAGCAGAACTTCCGCTTCGCGGCGAAGCTCGCCGACCGCCACTACGTGGTGGAGGACGGCCGCGTGGTGGAATCCTTCACTGCCGCCGACGTCGCCGGCGGCATCGACCGCATCGAGACCTATCTGAGGGTGTGA
PROTEIN sequence
Length: 229
MTPDASLQVRDLHGWYGESKALHGMNFEIGRGEVVTLLGRNGAGKTTTLRAIMGLLRKKTGEIRFRGEELCGRLPEYVARRGIAIFSSLTVEENLMLPPVVAEGGMAMDDILALFPNLAERRNSPGTKLSGGEQQMLAIARILRTGATLLLLDEPTEGLAPVIVKQIGAVIAKLKERGFTVLLVEQNFRFAAKLADRHYVVEDGRVVESFTAADVAGGIDRIETYLRV*