ggKbase home page

SCN18_10_11_15_R4_B_scaffold_830_5

Organism: SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial_69_13

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 5463..8492

Top 3 Functional Annotations

Value Algorithm Source
WD40 repeat, subgroup n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5H4_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 1003.0
  • Bit_score: 1191
  • Evalue 0.0
WD40 repeat, subgroup {ECO:0000313|EMBL:AEH86230.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 1003.0
  • Bit_score: 1191
  • Evalue 0.0
WD40 repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 1003.0
  • Bit_score: 1191
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3030
ATGAGGCCGGCGCGGCTCACCGCGCTGGCCGCGATCGCCGCCCTGCTCGCCCCGGCGGCGCTTGCCGCCGCGCCCGCGCCGCCGCCGCCCGACGACACGCCCGACTTCCACCTCGACCTCGACACCGGCGGCCATCGCGCCGCCGTGCGCGACCTCGCCGTCACGCCCGATGGGGAGACGCTGGTGTCGGCCTCGGAGGACAAGACGATCCGCGTCTGGGATTGGCGCGCCGGCGTGACGGTGCGCACCATCCGCGGCCAGATCGGCGACGGCAACGAGGGCAAGGTCTATGCGGTCGCCGTGGCGCCGGACGGGCAGACGGTGGCCGCCGGCGGCTATTTCGGCCCCGGCCTGGGCGACAAGCCGCCCTATGGCGACGTCCGCCTGTTCGACATCGGCTCCGGCCGCATGACCGGCGTGCTGAAGGGGCTGGACTACGCCGTCTACGGCCTCGACTTCTCGCCCGACGGCGCGCTGCTGGCGGCCGGCGGCGAGGACGGCATGGTACGGGTCTGGCAGAAGCCGGGAGAGGCGGGCGGCGAATGGACCGCACGCGCGCCGCTCGACGCCGATTCCTGGCGCATCGAGCGCGTCCGCTTCGCGCTCGGGGGCAAACGCATCGTCGCGATCACCGGCGACAACGGCGTGCGCCTGTGGGACGCGGACGGGACCGCGATCGACATGCCCGAGGCCGAGGAACTGCGCGACGTGCCCTTGCAGGGGCTGGCCGTCAGCCCGGACGGGACGCGCTTCGCAACTGCCGCCAGCGACGGCCGGCTCGAGGTGTGGGACGCCGCCGACGGCCGGCTCGTGCGCGCGCTGCCGAACCCCGGCTTCAGCGCCTCGGCCATCGCGTTCGCCTCCGGCGGGCGGCAGCTCGTCGTCAACTGCGGCTATCGCTGCGCCGACAGGAACCGGAGCCTCGTGCTCGACATCGAGAGCGGCGCGGTCGCTGCGGAATATCGCGGCCATGACGGCTCGGTGACGGCGGCGCTGCCTCTGCCCGACGGCAAGACGATCGCGACGGCGGGCGGCACCGGCAACGAGATCCATCTGTGGGACATCGCCTCAGGGGCGGGAACCAAGGTGCTGAAAGGCGTCGGCCGGCCGGTGACGGCGGTTGCGATCGACGCGGCGGCAGGGCTGATCGCCTGGGGCAACGACAATCCCTGCCCGGCCGAGATCGCCTGCCCCGAGGCGCGCGGGGCCCTCACCCGCCAGCTCCTGCTGCCCAACGCCGAGCGCAGCTTCGAGAAGCCGGCGGATGCCGGCGAGGCCGCGGCGAAGCTGCGGCGCGCCGTCCCGGAGGCCGGCGAATGGGCGATCCATGCCGGACCGGGCGGCGACTACGGCTTCGAGAACGCCGTGCTCGCCATCCGCCGCGACGGTGCGCCGGTGAAGGAGATCGAGAACGACGCGGAGACCGGCTTCACCCATTCCGCCTACACGCTGCTCGCTACCGCGCCGGAGCTTGTCACCGGCGCGGCCGACGGCACGCTGATCGCCTATCGCCGCGACGACGGCGGCTTCGCCGGCGAGTTCCTCGGCGGCCACACCGGCACGGTGGAGGCGATGGCCGAGGCGCCGAAGGCGAAATACCTGCTGACCGGCGGCGCCGACCAGACGCTGCGGCTGTGGAACCTCGCCACCCGCGAGCTGATCGTGTCGATGTTCTTCACCGACGAAGACTGGATCATGTGGACGCCGCAGGGCTATTTCCACTCCTCTCCCAACGGCGACCGGCTGATCGGCTGGCAGGTCAACCAGGGCAGCGGCAAGGAGGCCCGCTTCGTCAGGGCGCAGCAGCTGCGGGAACACCTGAACAGCCCAGAGATCGTGCGCCGCGCGATCATCATGGGCAGCGCCGAGAAGGCGGCGGTCGAGCTGCGCGGGACCGACAGGCAGCTCTTCGAGCTCCTGCGACGCAAGCCGCCGGACTTCTCGGTGAAGCTCGCGGAGGGCGTGACCGCGCCGGACGGCTACGTGGCGGTGGAGATCACCGGCGCGGCGGAGGCCGGCACCGACGTCTCGCAGTTCACTGTGCTTTCCAACGAGCGCCGCATCGACCAGTTCGCGGCGCGGGCGGCCGGCGGCGACAAGGTGATCATCGAAGTGCCGGTCGAGGAGGGCCAGAACGAGATCCTCGTCACCGGCTTCAACGAATACGGCTACCTGACCGAGCGCGGCGTGACCGCGCTGGCCAAGAAGCGCGCGCCGGCCGAGGAGAAGAAGGGCAAGCTCTACGCGGTGGTGATCGGCGTCGAGGACTATCCGCTGCTGCCAACCCAGTGCAACGGCCGCTCCTGCAACCTCGACTATCCCGTCGACGACGCGGCCGAGTTCCTGCGGGTGCTGGCCGAGCGCACCGCGCCGCTGTTCAGCGGCATGGAATCGCTGGTCTTCGTCAATGCGGACGCGCTCGACGCGGATCCGGACCGGGCGGCGGCGGTCGAGAAGCTCGCCGGCAAGCGCGGCATCCTCGATCCCGATTCGCGCACCATCGACGACGAGATGATCGACTTCCTCGACCAGCCCGGACCGGACGACACGACGATCATCTTCGTCGCCGGCCACGGCATCAACATCGACGAGGACTACTATTTCATCCCGACCGACGGCCGCATGCAGGACGAGGAGCGCTGGCGCCGCTCCTCGCTGGTCGACTGGCGCGACATCCAGGAGGCGGTGGAGCGGGCCAAGGGCCGGCGCATCATGGTGCTCGACACCTGCCACGCGGCGAACGCCTTCAACCCGCGTCTGGAGAAGGACGCGGCCGACGCGCGCATCATCGTCTTTTCGGCGACGGCCGCCAACAACACGGCCGCCGAGCTTCCCGAGCTCGGTCACGGCGTGTTCACCTATTCGATGCTGGAAGGGCTGAAGGGCCAGGCCAATACTGGCGGCGACGGCGTGCGGCTGCTGGGGCTGGCCGACTTCGTCTACCGGGAAGTGGTGCGCCTGTCGAAGAACAGGCAGGAGCCCTACTACCACATCGCCCAGACGGCGAACTTCCTGCTGGCCAAGCCGTGA
PROTEIN sequence
Length: 1010
MRPARLTALAAIAALLAPAALAAAPAPPPPDDTPDFHLDLDTGGHRAAVRDLAVTPDGETLVSASEDKTIRVWDWRAGVTVRTIRGQIGDGNEGKVYAVAVAPDGQTVAAGGYFGPGLGDKPPYGDVRLFDIGSGRMTGVLKGLDYAVYGLDFSPDGALLAAGGEDGMVRVWQKPGEAGGEWTARAPLDADSWRIERVRFALGGKRIVAITGDNGVRLWDADGTAIDMPEAEELRDVPLQGLAVSPDGTRFATAASDGRLEVWDAADGRLVRALPNPGFSASAIAFASGGRQLVVNCGYRCADRNRSLVLDIESGAVAAEYRGHDGSVTAALPLPDGKTIATAGGTGNEIHLWDIASGAGTKVLKGVGRPVTAVAIDAAAGLIAWGNDNPCPAEIACPEARGALTRQLLLPNAERSFEKPADAGEAAAKLRRAVPEAGEWAIHAGPGGDYGFENAVLAIRRDGAPVKEIENDAETGFTHSAYTLLATAPELVTGAADGTLIAYRRDDGGFAGEFLGGHTGTVEAMAEAPKAKYLLTGGADQTLRLWNLATRELIVSMFFTDEDWIMWTPQGYFHSSPNGDRLIGWQVNQGSGKEARFVRAQQLREHLNSPEIVRRAIIMGSAEKAAVELRGTDRQLFELLRRKPPDFSVKLAEGVTAPDGYVAVEITGAAEAGTDVSQFTVLSNERRIDQFAARAAGGDKVIIEVPVEEGQNEILVTGFNEYGYLTERGVTALAKKRAPAEEKKGKLYAVVIGVEDYPLLPTQCNGRSCNLDYPVDDAAEFLRVLAERTAPLFSGMESLVFVNADALDADPDRAAAVEKLAGKRGILDPDSRTIDDEMIDFLDQPGPDDTTIIFVAGHGINIDEDYYFIPTDGRMQDEERWRRSSLVDWRDIQEAVERAKGRRIMVLDTCHAANAFNPRLEKDAADARIIVFSATAANNTAAELPELGHGVFTYSMLEGLKGQANTGGDGVRLLGLADFVYREVVRLSKNRQEPYYHIAQTANFLLAKP*