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SCN18_10_11_15_R4_B_scaffold_830

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R4_B_scaffold_830_1
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2011
DNA (2010bp) protein (670aa)
DNA polymerase I n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D24E6
DNA polymerase I {ECO:0000313|EMBL:ESY70554.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
DNA polymerase I
SCN18_10_11_15_R4_B_scaffold_830_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2109..4379
DNA (2271bp) protein (757aa)
UPI0003D01910 related cluster n=1 Tax=unknown RepID=UPI0003D01910
Peptidase C14 {ECO:0000313|EMBL:ESZ52765.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_830_3
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4376..4795
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FCY7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX64910.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_830_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4795..5466
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037D7B49
Uncharacterized protein {ECO:0000313|EMBL:AID32540.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_830_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5463..8492
DNA (3030bp) protein (1010aa)
WD40 repeat, subgroup n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y5H4_MESOW
WD40 repeat, subgroup {ECO:0000313|EMBL:AEH86230.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
WD40 repeat-containing protein
SCN18_10_11_15_R4_B_scaffold_830_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8489..10204
DNA (1716bp) protein (572aa)
UPI0003CF51E1 related cluster n=1 Tax=unknown RepID=UPI0003CF51E1
Encapsulation protein CapA {ECO:0000313|EMBL:ESX07900.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
capsule synthesis protein CapA
SCN18_10_11_15_R4_B_scaffold_830_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10171..11964)
DNA (1794bp) protein (598aa)
Mll3305 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GI8_RHILO
hypothetical protein
Mll3305 protein {ECO:0000313|EMBL:BAB50228.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_10_11_15_R4_B_scaffold_830_8
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12102..13331)
DNA (1230bp) protein (410aa)
Glutamyl endopeptidase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Z3_9RHIZ
Glutamyl endopeptidase {ECO:0000313|EMBL:EHH13228.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
peptidase S1 and S6 chymotrypsin/Hap
SCN18_10_11_15_R4_B_scaffold_830_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13450..14469
DNA (1020bp) protein (340aa)
UPI0003CF58B1 related cluster n=1 Tax=unknown RepID=UPI0003CF58B1
Serine protease {ECO:0000313|EMBL:ESY77744.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
peptidase S1 and S6 chymotrypsin/Hap
SCN18_10_11_15_R4_B_scaffold_830_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14590..15291)
DNA (702bp) protein (234aa)
Histidine utilization repressor n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C727_9RHIZ
Histidine utilization repressor {ECO:0000313|EMBL:EIM77629.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hutC; histidine utilization repressor
SCN18_10_11_15_R4_B_scaffold_830_11
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15288..16655)
DNA (1368bp) protein (456aa)
hutF; Formiminoglutamate deiminase (EC:3.5.3.13)
N-formimino-L-glutamate deiminase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M9R6_9RHIZ
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:EKF18886.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCN18_10_11_15_R4_B_scaffold_830_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16729..17925
DNA (1197bp) protein (399aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Imidazolonepropionase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C725_9RHIZ
Imidazolonepropionase
SCN18_10_11_15_R4_B_scaffold_830_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17922..19454
DNA (1533bp) protein (511aa)
hutH3; Histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Histidine ammonia-lyase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UIH5_SINMW
SCN18_10_11_15_R4_B_scaffold_830_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19451..20257
DNA (807bp) protein (269aa)
N-formylglutamate amidohydrolase HutG {ECO:0000313|EMBL:EYR80694.1}; EC=3.5.1.68 {ECO:0000313|EMBL:EYR80694.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
N-formylglutamate amidohydrolase HutG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4F8_9RHIZ
hutG; putative formiminoglutamase protein
SCN18_10_11_15_R4_B_scaffold_830_15
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20254..21930
DNA (1677bp) protein (559aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MNL7_9RHIZ
SCN18_10_11_15_R4_B_scaffold_830_16
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21945..22736)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E7D20
CoA-transferase subunit beta {ECO:0000313|EMBL:ENO81145.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
acyl CoA:acetate/3-ketoacid CoA transferase subunit beta
SCN18_10_11_15_R4_B_scaffold_830_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22748..23626)
DNA (879bp) protein (293aa)
putative CoA-transferase alpha subunit (EC:2.8.3.-)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373C452
Coenzyme A transferase {ECO:0000313|EMBL:KGB53947.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
SCN18_10_11_15_R4_B_scaffold_830_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23980..25179
DNA (1200bp) protein (400aa)
putative periplasmic binding ABC transporter protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557D2B
ABC transporter substrate-binding protein
Putative substrate-binding component of ABC transporter {ECO:0000313|EMBL:ACP26795.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCN18_10_11_15_R4_B_scaffold_830_19
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25259..25570
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557D2C
Uncharacterized protein {ECO:0000313|EMBL:KFL53958.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
hypothetical protein
SCN18_10_11_15_R4_B_scaffold_830_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25567..26163
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000377FC99
Branched-chain amino acid transport ATP-binding protein LivG
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22755.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
Displaying 20 items

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