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SCN18_10_11_15_R1_B_scaffold_810

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_810_1
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..820
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D5CB71
HAD superfamily P-type ATPase
Carbonate dehydratase {ECO:0000313|EMBL:KIZ48089.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCN18_10_11_15_R1_B_scaffold_810_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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877..1719
DNA (843bp) protein (281aa)
Universal stress protein UspA n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HAH0_9PROT
Universal stress protein UspA {ECO:0000313|EMBL:EKV27573.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
UspA domain-containing protein
SCN18_10_11_15_R1_B_scaffold_810_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1907..3094
DNA (1188bp) protein (396aa)
Phosphatidylserine decarboxylase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H3F0_9BRAD
Phosphatidylserine decarboxylase {ECO:0000313|EMBL:ERF84297.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
cytochrome P450
SCN18_10_11_15_R1_B_scaffold_810_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3228..4388
DNA (1161bp) protein (387aa)
TRAP transporter solute receptor TAXI family protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JM50_9PROT
TRAP transporter solute receptor TAXI family protein {ECO:0000313|EMBL:EKE71574.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_810_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4711..5136
DNA (426bp) protein (142aa)
Peptidase M15A n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J5J4_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:CPR21254.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
peptidase M15A
SCN18_10_11_15_R1_B_scaffold_810_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5309..6454
DNA (1146bp) protein (382aa)
Glucose sorbosone dehydrogenase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A3A6_STAND
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:KFC73958.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glucose sorbosone dehydrogenase
SCN18_10_11_15_R1_B_scaffold_810_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6738..7280
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035FA947
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:AHB48868.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_810_8
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7294..8406)
DNA (1113bp) protein (371aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Alanine racemase n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1N5_POLGS
alanine racemase
SCN18_10_11_15_R1_B_scaffold_810_9
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8462..9985)
DNA (1524bp) protein (508aa)
DNA helicase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFR1_9RHIZ
DNA helicase
DNA helicase {ECO:0000313|EMBL:AHB48865.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_810_10
SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, SCNPILOT_EXPT_1000_BF_Thiobacillus_strain2_65_27, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10228..11808
DNA (1581bp) protein (527aa)
IMP cyclohydrolase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SA76_9RHIZ
IMP cyclohydrolase
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_810_11
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11816..12313
DNA (498bp) protein (166aa)
Aminoglycoside 6-adenylyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9B3_9RHIZ
aminoglycoside 6-adenylyltransferase
Aminoglycoside 6-adenylyltransferase {ECO:0000313|EMBL:AHB47321.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_810_12
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12310..12855)
DNA (546bp) protein (182aa)
hpt; hypoxanthine phosphoribosyl transferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyl transferase {ECO:0000313|EMBL:CCB67270.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CCB67270.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Hypoxanthine phosphoribosyl transferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7F6_HYPSM
SCN18_10_11_15_R1_B_scaffold_810_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13094..13750
DNA (657bp) protein (219aa)
Cell division protein FtsE n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC29_9RHIZ
cell division protein FtsE
Cell division protein FtsE {ECO:0000313|EMBL:AHB47585.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_810_14
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13734..14834
DNA (1101bp) protein (367aa)
Cell division ABC transporter membrane protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BGB9_9RHIZ
Cell division ABC transporter membrane protein {ECO:0000313|EMBL:CPR18193.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
cell division ABC transporter membrane protein
SCN18_10_11_15_R1_B_scaffold_810_15
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14966..15595
DNA (630bp) protein (210aa)
membrane protein n=1 Tax=Rhizobium phaseoli RepID=UPI000379B080
YdcF-like protein
YdcF-like protein {ECO:0000313|EMBL:AIC29170.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCN18_10_11_15_R1_B_scaffold_810_16
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15678..16223
DNA (546bp) protein (182aa)
Ferric uptake regulator, Fur family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JY70_HYPDA
Fur family ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ADJ25274.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_10_11_15_R1_B_scaffold_810_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16220..16996)
DNA (777bp) protein (259aa)
Molybdenum cofactor sulfurase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCA2_9RHIZ
molybdenum cofactor sulfurase
Molybdenum cofactor sulfurase {ECO:0000313|EMBL:AHB47655.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_810_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17020..17688)
DNA (669bp) protein (223aa)
Alpha/beta hydrolase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SEZ7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR15316.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
alpha/beta hydrolase
SCN18_10_11_15_R1_B_scaffold_810_19
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18039..18512
DNA (474bp) protein (158aa)
Rrf2 family transcriptional regulator (EC:2.8.1.7)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000364C862
DNA-binding transcriptional repressor (Modular protein) {ECO:0000313|EMBL:CPR15321.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
SCN18_10_11_15_R1_B_scaffold_810_20
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18509..19651
DNA (1143bp) protein (381aa)
Rrf2 family transcriptional regulator (EC:2.8.1.7)
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:CCB64325.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCB64325.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Transcriptional regulator, Rrf2 family n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGL7_HYPSM
SCN18_10_11_15_R1_B_scaffold_810_21
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19698..20321
DNA (624bp) protein (208aa)
cysteine desulfarase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D3297B
sufB; FeS assembly protein SufB
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EKF17314.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Displaying 21 items

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