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SCN18_10_11_15_R1_B_scaffold_1388

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_1388_1
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..312
DNA (312bp) protein (104aa)
Putative AraC-family transcriptional regulator id=1348420 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
AraC family transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
SCN18_10_11_15_R1_B_scaffold_1388_2
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(337..2331)
DNA (1995bp) protein (665aa)
Dehydrogenase E1 component n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ESH0_9RHIZ
Dehydrogenase E1 component {ECO:0000313|EMBL:CCV07232.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
dehydrogenase, E1 component
SCN18_10_11_15_R1_B_scaffold_1388_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2495..2845)
DNA (351bp) protein (117aa)
Porin n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I2A8_RHOVT
Putative 25 kDa outer-membrane immunogenic protein {ECO:0000313|EMBL:CPR20724.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
porin
SCN18_10_11_15_R1_B_scaffold_1388_4
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3313..4524
DNA (1212bp) protein (404aa)
Cytochrome P450 n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THY2_TISMK
pksS; cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:AFK52370.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_10_11_15_R1_B_scaffold_1388_5
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4573..5004)
DNA (432bp) protein (144aa)
Cupin 2, conserved barrel n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHB2_NITHX
cupin
Cupin 2, conserved barrel {ECO:0000313|EMBL:ABE64385.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_10_11_15_R1_B_scaffold_1388_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5086..6291)
DNA (1206bp) protein (402aa)
Cytochrome P450 n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B797_9RHIZ
cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:AGK58117.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_10_11_15_R1_B_scaffold_1388_7
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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6677..7489
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000382E3A5
beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AHG92499.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCN18_10_11_15_R1_B_scaffold_1388_8
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7556..8143)
DNA (588bp) protein (196aa)
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A389_STAND
methylated-DNA--protein-cysteine methyltransferase
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:EJK83848.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCN18_10_11_15_R1_B_scaffold_1388_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8233..8610)
DNA (378bp) protein (126aa)
Lactoylglutathione lyase (Aldoketomutase)-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y635_RAMTT
lactoylglutathione lyase
Lactoylglutathione lyase (Aldoketomutase)-like protein {ECO:0000313|EMBL:AEG91539.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCN18_10_11_15_R1_B_scaffold_1388_10
unknown

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comp(8718..8999)
DNA (282bp) protein (94aa)

This feature has no annotations

SCN18_10_11_15_R1_B_scaffold_1388_11
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9201..9932
DNA (732bp) protein (244aa)
Transcriptional regulator, DeoR family n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QRQ7_9RHIZ
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ESR22417.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
DNA-binding protein
SCN18_10_11_15_R1_B_scaffold_1388_12
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10017..10535
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036A09C6
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EJK81828.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCN18_10_11_15_R1_B_scaffold_1388_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10545..10925
DNA (381bp) protein (127aa)
Membrane fusion component of tripartite multidrug resistance system n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TNX0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO38619.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
secretion protein HlyD
SCN18_10_11_15_R1_B_scaffold_1388_14
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11064..11726
DNA (663bp) protein (221aa)
Putative multidrug resistance protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IER3_9SPHN
putative multidrug resistance protein
Putative multidrug resistance protein {ECO:0000313|EMBL:CCA90788.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCN18_10_11_15_R1_B_scaffold_1388_15
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11723..13288
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000318DCB4
DSBA oxidoreductase {ECO:0000313|EMBL:KKC98742.1}; TaxID=265726 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium halotolerans.;"
drug resistance MFS transporter drug:H+ antiporter-1 family
SCN18_10_11_15_R1_B_scaffold_1388_16
SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, SCNPILOT_EXPT_750_BF_Bacteroidetes_42_16, Bacteroidetes, Bacteria

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comp(13310..14470)
DNA (1161bp) protein (387aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA11566.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Hypothetical conserved protein id=3899696 bin=GWF2_Bacteroidetes_38_335 species=uncultured planctomycete genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
SCN18_10_11_15_R1_B_scaffold_1388_17
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14750..15316
DNA (567bp) protein (189aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDN1_9RHIZ
signal peptide peptidase SppA, 36K type
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:AGK58591.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
Displaying 17 items

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