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SCN18_10_11_15_R1_B_scaffold_1448

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_1448_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(90..1031)
DNA (942bp) protein (314aa)
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA {ECO:0000256|HAMAP-Rule:MF_01728, ECO:0000313|EMBL:CPR19403.1}; EC=3.6.3.42 {ECO:0000256|HAMAP-Rule:MF_01728, ECO:0000313|EMBL:CPR19403.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000370D027
glucan exporter ATP-binding protein
SCN18_10_11_15_R1_B_scaffold_1448_2
unknown

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1198..1962
DNA (765bp) protein (255aa)

This feature has no annotations

SCN18_10_11_15_R1_B_scaffold_1448_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1845..3164)
DNA (1320bp) protein (440aa)
Putative oxidoreductase protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR10_9RHOB
Oxidoreductase {ECO:0000313|EMBL:KEQ04270.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
putative oxidoreductase
SCN18_10_11_15_R1_B_scaffold_1448_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3320..4303)
DNA (984bp) protein (328aa)
Beta-lactamase domain-containing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A599_STAND
Beta-lactamase domain protein {ECO:0000313|EMBL:CPR18091.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
beta-lactamase domain-containing protein
SCN18_10_11_15_R1_B_scaffold_1448_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4886..5374
DNA (489bp) protein (163aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YU62_9RHIZ
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:KFC67626.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
(2Fe-2S)-binding domain-containing protein
SCN18_10_11_15_R1_B_scaffold_1448_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5402..7768
DNA (2367bp) protein (789aa)
carbon-monoxide dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EEECE0
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:KFC67625.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
aldehyde oxidase/xanthine dehydrogenase
SCN18_10_11_15_R1_B_scaffold_1448_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7780..8571
DNA (792bp) protein (264aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KJY7_9PROT
Carbon monoxide dehydrogenase {ECO:0000313|EMBL:KGM34026.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
carbon monoxide dehydrogenase medium subunit
SCN18_10_11_15_R1_B_scaffold_1448_8
unknown

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comp(8731..9177)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003651053
SCN18_10_11_15_R1_B_scaffold_1448_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9347..10225)
DNA (879bp) protein (293aa)
branched-chain amino acid aminotransferase n=1 Tax=Methylosinus sp. LW4 RepID=UPI000375C9A4
Branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:CEJ14437.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
branched-chain amino acid transferase
SCN18_10_11_15_R1_B_scaffold_1448_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10579..11121
DNA (543bp) protein (181aa)
HTH-type transcriptional regulator PetP n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAJ9_9RHIZ
HTH-type transcriptional regulator PetP {ECO:0000313|EMBL:ESR23206.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
MarR family transcriptional regulator
SCN18_10_11_15_R1_B_scaffold_1448_11
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11118..11834
DNA (717bp) protein (239aa)
Winged helix family two component transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BEF2_9RHIZ
DNA-binding response regulator in two-component regulatory system with EnvZ {ECO:0000313|EMBL:CPR20083.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
winged helix family two component transcriptional regulator
SCN18_10_11_15_R1_B_scaffold_1448_12
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11888..13303
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
envZ; osmolarity sensor protein EnvZ (EC:2.7.13.3)
Osmolarity sensor protein EnvZ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYA7_9RHIZ
Displaying 12 items

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