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SCN18_10_11_15_R1_B_scaffold_1554

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_1554_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..751)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DF1C30
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC391B00.;"
flagellar basal body L-ring protein
SCN18_10_11_15_R1_B_scaffold_1554_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(781..1416)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000375F4FC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX32639.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCN18_10_11_15_R1_B_scaffold_1554_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1439..2551)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035FF3B2
Uncharacterized protein {ECO:0000313|EMBL:KKN87219.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
flgI; flagellar basal body P-ring protein
SCN18_10_11_15_R1_B_scaffold_1554_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2556..3020)
DNA (465bp) protein (155aa)
FlgA protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89F29_BRADU
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
flgA; flagellar basal body P-ring biosynthesis protein FlgA
SCN18_10_11_15_R1_B_scaffold_1554_5
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3071..3859)
DNA (789bp) protein (263aa)
flagellar basal-body rod protein FlgG n=1 Tax=Pannonibacter phragmitetus RepID=UPI000379A6E5
Flagellar component of cell-distal portion of basal-body rod {ECO:0000313|EMBL:CPR22188.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
flgG; flagellar basal body rod protein FlgG
SCN18_10_11_15_R1_B_scaffold_1554_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3878..4231)
DNA (354bp) protein (118aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3I0E3_9RHIZ
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
fliE; flagellar hook-basal body protein FliE
SCN18_10_11_15_R1_B_scaffold_1554_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4231..4650)
DNA (420bp) protein (140aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HD9_RHILO
flgC; flagellar basal body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_10_11_15_R1_B_scaffold_1554_8
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4654..5034)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036981F7
flgB; flagellar basal body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_1554_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5056..5529)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000381252A
Uncharacterized protein {ECO:0000313|EMBL:CDX28345.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_1554_10
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5530..6624)
DNA (1095bp) protein (365aa)
Flagellar biosynthesis protein FlhB n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAH5_9RHIZ
flhB; flagellar biosynthesis protein FlhB
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:AHB47761.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_1554_11
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6710..7093)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003748688
Uncharacterized protein {ECO:0000313|EMBL:CPR22182.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
flagellar motor switch protein FliN
SCN18_10_11_15_R1_B_scaffold_1554_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7118..8008)
DNA (891bp) protein (297aa)
Chemotaxis protein MotA (Motility protein A) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JC89_HYPSM
Motility protein A {ECO:0000313|EMBL:CPR22181.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
motA; chemotaxis protein MotA
SCN18_10_11_15_R1_B_scaffold_1554_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8189..8965
DNA (777bp) protein (259aa)
Flagellar basal-body rod protein flgf n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J4M0_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KKN87206.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
flagellar basal-body rod protein flgf
SCN18_10_11_15_R1_B_scaffold_1554_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8969..9694
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037BAC65
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:EAS51723.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
flgF; Flagellar basal-body rod protein flgF
SCN18_10_11_15_R1_B_scaffold_1554_15
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9766..11211
DNA (1446bp) protein (482aa)
fliI; ATP synthase (EC:3.6.3.14)
ATP synthase {ECO:0000313|EMBL:AHB47756.1}; EC=3.6.3.14 {ECO:0000313|EMBL:AHB47756.1};; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
ATP synthase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAH0_9RHIZ
SCN18_10_11_15_R1_B_scaffold_1554_16
unknown

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comp(11384..11587)
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying 16 items

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