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SCN18_10_11_15_R1_B_scaffold_1745

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_1745_1
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..365)
DNA (363bp) protein (121aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI6_HYPDA
flavoprotein WrbA
SCN18_10_11_15_R1_B_scaffold_1745_2
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(493..1197)
DNA (705bp) protein (235aa)
Putative Quercetin 2,3-dioxygenase {ECO:0000313|EMBL:CPR16913.1}; EC=1.13.11.24 {ECO:0000313|EMBL:CPR16913.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI00036B9969
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_1745_3
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1325..2239
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVI5_HYPDA
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADJ24839.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_10_11_15_R1_B_scaffold_1745_4
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2318..2893
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H259_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV31627.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
nitroreductase
SCN18_10_11_15_R1_B_scaffold_1745_5
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2933..4063
DNA (1131bp) protein (377aa)
Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase {ECO:0000313|EMBL:CDM23761.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CDM23761.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
cysteine desulfurase n=1 Tax=Afipia birgiae RepID=UPI00035CB0F0
SCN18_10_11_15_R1_B_scaffold_1745_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4264..4623
DNA (360bp) protein (120aa)
Putative transcriptional regulator, ModE family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS28_HYPDA
ModE family transcriptional regulator
Putative transcriptional regulator, ModE family {ECO:0000313|EMBL:ADJ22287.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_10_11_15_R1_B_scaffold_1745_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4771..5541
DNA (771bp) protein (257aa)
Molybdenum ABC transporter periplasmic molybdate-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N502_9RHIZ
Molybdate-binding periplasmic protein {ECO:0000313|EMBL:CPR19239.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
molybdenum ABC transporter periplasmic molybdate-binding protein
SCN18_10_11_15_R1_B_scaffold_1745_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5555..6244
DNA (690bp) protein (230aa)
Molybdenum ABC transporter (Permease protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APG7_AZOBR
Molybdenum transport system permease protein ModB {ECO:0000313|EMBL:CPR19236.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
modB; molybdenum ABC transporter (permease protein)
SCN18_10_11_15_R1_B_scaffold_1745_9
SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, SCNPILOT_EXPT_750_BF_Thiobacillus_SCN1_63_220, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6241..7347
DNA (1107bp) protein (369aa)
Molybdenum import ATP-binding protein ModC {ECO:0000256|HAMAP-Rule:MF_01705, ECO:0000313|EMBL:CPR19233.1}; EC=3.6.3.29 {ECO:0000256|HAMAP-Rule:MF_01705, ECO:0000313|EMBL:CPR19233.1};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Molybdenum ABC transporter (ATP-binding protein) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8APG8_AZOBR
molybdenum ABC transporter ATP-binding protein
SCN18_10_11_15_R1_B_scaffold_1745_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7369..7827)
DNA (459bp) protein (153aa)
Endoribonuclease L-PSP n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9J5_METS4
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:KFC64160.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endoribonuclease L-PSP
SCN18_10_11_15_R1_B_scaffold_1745_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7840..9015)
DNA (1176bp) protein (392aa)
Dihydroorotase {ECO:0000313|EMBL:EJZ35040.1}; EC=3.5.2.3 {ECO:0000313|EMBL:EJZ35040.1};; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
dihydroorotase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000380C828
dihydroorotase
SCN18_10_11_15_R1_B_scaffold_1745_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9406..10488
DNA (1083bp) protein (361aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SI58_9RHIZ
phospho-N-acetylmuramoyl-pentapeptide-transferase
SCN18_10_11_15_R1_B_scaffold_1745_13
unknown

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10513..10593
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 13 items

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