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SCN18_10_11_15_R1_B_scaffold_1847

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_1847_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..318
DNA (318bp) protein (106aa)
Fe-S type hydro-lyase tartrate/fumarate beta region n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWE4_METNO
Fe-S type hydro-lyase tartrate/fumarate beta region
Fe-S type hydro-lyase tartrate/fumarate beta region {ECO:0000313|EMBL:ACL62734.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_10_11_15_R1_B_scaffold_1847_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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340..603
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037F0B7B
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCN18_10_11_15_R1_B_scaffold_1847_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(614..1348)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00037D3E50
Uncharacterized protein {ECO:0000313|EMBL:EIT69118.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_1847_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1582..2055)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JE27_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64042.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_10_11_15_R1_B_scaffold_1847_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2142..2810)
DNA (669bp) protein (223aa)
Major intrinsic protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRS8_HYPDA
Aquaporin Z {ECO:0000313|EMBL:ETR77978.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
major intrinsic protein
SCN18_10_11_15_R1_B_scaffold_1847_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2952..3635)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SDJ9_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CPR14914.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_1847_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3859..5664
DNA (1806bp) protein (602aa)
Putative gamma-glutamyltranspeptidase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZBE8_9BRAD
putative gamma-glutamyltranspeptidase
Putative gamma-glutamyltranspeptidase {ECO:0000313|EMBL:BAM91084.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCN18_10_11_15_R1_B_scaffold_1847_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5646..6092)
DNA (447bp) protein (149aa)
SCN18_10_11_15_R1_B_scaffold_1847_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6580..6990)
DNA (411bp) protein (137aa)
SCN18_10_11_15_R1_B_scaffold_1847_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7484..7846)
DNA (363bp) protein (121aa)
SCN18_10_11_15_R1_B_scaffold_1847_trna_1
unknown

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comp(8129..8200)
DNA (72bp)
transferRNA Val
SCN18_10_11_15_R1_B_scaffold_1847_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8315..9385)
DNA (1071bp) protein (357aa)
Geranylgeranyl reductase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1C6_9RHOB
geranylgeranyl reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCN18_10_11_15_R1_B_scaffold_1847_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9397..9927)
DNA (531bp) protein (177aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
Adenine phosphoribosyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFS7_9RHIZ
adenine phosphoribosyltransferase
SCN18_10_11_15_R1_B_scaffold_1847_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9971..10171)
DNA (201bp) protein (67aa)
Putative oxidoreductase n=3 Tax=Bordetella RepID=Q7W4M0_BORPA
oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Displaying 14 items

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