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SCN18_10_11_15_R1_B_scaffold_2157

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_2157_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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30..2702
DNA (2673bp) protein (891aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J602_HYPSM
SCN18_10_11_15_R1_B_scaffold_2157_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2819..3187)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4R7_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58494.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_10_11_15_R1_B_scaffold_2157_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3248..3424)
DNA (177bp) protein (59aa)
Putative histone protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WXZ0_BACMS
putative histone protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
SCN18_10_11_15_R1_B_scaffold_2157_4
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3585..4433
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003819D76
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCB64415.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_10_11_15_R1_B_scaffold_2157_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4499..5215
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E724B4
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:KFC66766.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_2157_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5232..6332
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium FLS18 RepID=C6G402_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACS68537.1}; TaxID=654935 species="Bacteria; environmental samples.;" source="uncultured bacterium FLS18.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_2157_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6564..7715
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TU64_TISMK
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCN18_10_11_15_R1_B_scaffold_2157_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7712..8722
DNA (1011bp) protein (337aa)
Acyl-CoA dehydrogenase domain protein id=2883311 bin=GWA2_Methylomirabilis_73_35 species=Parvibaculum lavamentivorans genus=Parvibaculum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCN18_10_11_15_R1_B_scaffold_2157_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8966..9814
DNA (849bp) protein (283aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9V1_9PROT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EKE71592.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
NAD-dependent epimerase/dehydratase
SCN18_10_11_15_R1_B_scaffold_2157_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9860..10060
DNA (201bp) protein (67aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 10 items

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