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SCN18_10_11_15_R1_B_scaffold_2913

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_2913_1
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..804)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035CDA5C
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:AHB48550.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_2913_2
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(801..1394)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037CB0AB
riboflavin synthase subunit alpha
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:AHB48549.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_2913_3
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1557..2519
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D7F593
6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:KGF70289.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
AraC family transcriptional regulator
SCN18_10_11_15_R1_B_scaffold_2913_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2759..3508
DNA (750bp) protein (250aa)
acetylglucosamine transferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003602F6B
outer-membrane immunogenic protein
Blr7695 protein {ECO:0000313|EMBL:BAC52960.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCN18_10_11_15_R1_B_scaffold_2913_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3841..4542
DNA (702bp) protein (234aa)
acetylglucosamine transferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034BC4A9
Uncharacterized protein {ECO:0000313|EMBL:EJZ34522.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
putative outer membrane protein
SCN18_10_11_15_R1_B_scaffold_2913_6
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4574..4996)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBU7_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB48003.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_2913_7
unknown

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comp(5052..5594)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000374EB40
Uncharacterized protein {ECO:0000313|EMBL:CPR16673.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_2913_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5750..6160)
DNA (411bp) protein (137aa)
Neutral zinc metallopeptidase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAZ3_9RHIZ
Neutral zinc metallopeptidase
Neutral zinc metallopeptidase {ECO:0000313|EMBL:AHB48001.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_2913_9
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6255..6995)
DNA (741bp) protein (247aa)
Transition state regulatory protein AbrB (HMMer)
Putative ammonia monooxygenase n=1 Tax=Citreicella sp. SE45 RepID=D0DDQ8_9RHOB
Putative ammonia monooxygenase {ECO:0000313|EMBL:EEX11900.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
hypothetical protein
Displaying 9 items

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