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SCN18_10_11_15_R1_B_scaffold_3017

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_3017_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..149)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0URP0_ALCFA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_10_11_15_R1_B_scaffold_3017_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(178..1311)
DNA (1134bp) protein (378aa)
Carboxypeptidase {ECO:0000313|EMBL:EKE75544.1}; EC=3.4.17.11 {ECO:0000313|EMBL:EKE75544.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
carboxypeptidase (EC:3.4.17.11)
carboxypeptidase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B63DE7
SCN18_10_11_15_R1_B_scaffold_3017_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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1647..2840
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000361E67B
iron-containing alcohol dehydrogenase
Tax=RBG_13_Deltaproteobacteria_43_22_curated
SCN18_10_11_15_R1_B_scaffold_3017_4
CN-SCN_Rubrivivax_131x, CN-SCN_Rubrivivax_131x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2855..4132)
DNA (1278bp) protein (426aa)
major facilitator transporter id=5080812 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
major facilitator transporter
Tax=BJP_08E140C01_Burkholderiales_65_30
SCN18_10_11_15_R1_B_scaffold_3017_5
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4431..4922
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFM6_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB64192.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_10_11_15_R1_B_scaffold_3017_6
unknown

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5033..5392
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E0702
Uncharacterized protein {ECO:0000313|EMBL:CPR20293.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_3017_7
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5456..5782)
DNA (327bp) protein (109aa)
Sulfur oxidation protein SoxZ n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JF67_HYPSM
soxZ; sulfur oxidation protein SoxZ
Sulfur oxidation protein SoxZ {ECO:0000313|EMBL:CCB65423.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_10_11_15_R1_B_scaffold_3017_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5806..6285)
DNA (480bp) protein (160aa)
sulfur oxidation protein SoxY n=1 Tax=Afipia birgiae RepID=UPI00031E8FA8
Sulfur oxidation protein SoxY {ECO:0000313|EMBL:CPR21391.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
sulfur oxidation protein SoxY
SCN18_10_11_15_R1_B_scaffold_3017_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6451..6810
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBG6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26200.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 9 items

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