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SCN18_10_11_15_R1_B_scaffold_3024

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_3024_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..122
DNA (120bp) protein (40aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000378BC99
SCN18_10_11_15_R1_B_scaffold_3024_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(254..784)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SBK9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CPR17040.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCN18_10_11_15_R1_B_scaffold_3024_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(845..1402)
DNA (558bp) protein (186aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDW6_HYPSM
tRNA/rRNA methyltransferase (SpoU) (Modular protein) {ECO:0000313|EMBL:CPR17044.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
tRNA/rRNA methyltransferase SpoU
SCN18_10_11_15_R1_B_scaffold_3024_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1454..2428
DNA (975bp) protein (325aa)
NADPH:quinone oxidoreductase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S9W6_9RHIZ
NADPH:quinone oxidoreductase
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:AHB47418.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_3024_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2580..3311
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7SXH0_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:CPR18400.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
permease
SCN18_10_11_15_R1_B_scaffold_3024_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3321..4583)
DNA (1263bp) protein (421aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY50_PARL1
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:CPR22602.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
major facilitator superfamily transporter
SCN18_10_11_15_R1_B_scaffold_3024_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4620..5054)
DNA (435bp) protein (145aa)
ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:BAQ18571.1}; EC=3.6.1.13 {ECO:0000313|EMBL:BAQ18571.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
NUDIX hydrolase, core domain protein n=1 Tax=mine drainage metagenome RepID=T0ZZT2_9ZZZZ
SCN18_10_11_15_R1_B_scaffold_3024_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5092..5394)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7R0_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59033.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_10_11_15_R1_B_scaffold_3024_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5426..6235)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037F1CE4
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KFG67839.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
N-formylglutamate amidohydrolase
SCN18_10_11_15_R1_B_scaffold_3024_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6285..6725)
DNA (441bp) protein (147aa)
Glycine cleavage system H protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JT31_HYPDA
glycine cleavage system protein H
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 10 items

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