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SCN18_10_11_15_R1_B_scaffold_3848

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_B_scaffold_3848_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..951
DNA (951bp) protein (317aa)
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036CC87F
cyclopropane-fatty-acyl-phospholipid synthase
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:KFG69105.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCN18_10_11_15_R1_B_scaffold_3848_2
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(958..1326)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036ED803
30S ribosomal protein S30
30S ribosomal protein S30 {ECO:0000313|EMBL:AHB49468.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_10_11_15_R1_B_scaffold_3848_3
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1514..2266
DNA (753bp) protein (251aa)
Strain UM270 sctg_0018_0001, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ60827.1}; EC=1.1.1.47 {ECO:0000313|EMBL:KIQ60827.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
sugar dehydrogenase (EC:1.1.1.47)
Short chain dehydrogenase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QWP2_9RHIZ
SCN18_10_11_15_R1_B_scaffold_3848_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2555..3760)
DNA (1206bp) protein (402aa)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:CCD84084.1}; EC=1.3.8.6 {ECO:0000313|EMBL:CCD84084.1};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
Glutaryl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RQ57_9BRAD
glutaryl-CoA dehydrogenase
SCN18_10_11_15_R1_B_scaffold_3848_5
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3824..4504)
DNA (681bp) protein (227aa)
isochorismatase (EC:3.3.2.1)
Nicotinamidase-like amidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNH9_9RHIZ
Nicotinamidase-like amidase {ECO:0000313|EMBL:EIM25521.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCN18_10_11_15_R1_B_scaffold_3848_trna_1
unknown

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4748..4820
DNA (73bp)
transferRNA Trp
SCN18_10_11_15_R1_B_scaffold_3848_6
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4923..5120
DNA (198bp) protein (66aa)
Protein translocase subunit SecE n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J599_HYPSM
protein translocation preprotein SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_10_11_15_R1_B_scaffold_3848_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5184..5540
DNA (357bp) protein (119aa)
transcription antitermination protein NusG n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037639A3
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
Displaying 8 items

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