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SCN18_10_11_15_R1_B_scaffold_3055_4

Organism: SCN18_10_11_15_R1_B_Rhizobiales_65_8

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(1465..2916)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM3_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 481.0
  • Bit_score: 394
  • Evalue 8.50e-107
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 481.0
  • Bit_score: 394
  • Evalue 2.40e-107
Type II and III secretion system protein {ECO:0000313|EMBL:ABS61856.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 481.0
  • Bit_score: 394
  • Evalue 1.20e-106

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGATCATCGCCTTTGGCGGCGGCGCTGCCATGGCACAGGGGAGGGATGCCGCGAGCTTCGGTGATGAGCCGGGGCACCGCTCCTATCTCAGGGTTCCAGCGAATACGCCGTTGCCGGCGACGCGGCGGATCACGATCGGCGCCGACAAGTCGATGCTGGTCGAGCTTCCAGTCGATCTCGACAACGTCCTCATATCGAATCCCGAGGTCGTCAACGCGGTCGTCAAATCGCAGCGCCAAGTCTATCTGCTGGCCAAGGATCAGGGCGAGGCCAACGCCTTCTTCATGGGCCCGAACGGGCAGAAGATCCTGCTGCTCGAGGTCGTCGTCGCGCGCGATCTCAGCGCTCTCAACGAAGCGCTGCACCGCCTCTTGCCGGGATCGAAGATAGCCGTCGAGCCGATGGGCGATCAGGTCGTCCTCACCGGTAGCGTGATGACGCCGGTCGATGCCAATCGCGCTGCCGAGATCGCGACGCGCGCAATGAAGAAGAAGGACAGCGTGATCAACATGCTGACCGTGGCCGAGCCGACCAAGGAGCAGGTTCTGCTCAAGGTGACGGTCGCGGAGATGCAGCGGGACGCGCTGCGCCGCCTCGGCGTCGACTTCCCGAATGCGGTTCTGCAAAGCGGTAACTTCACATTCCAGAAGATCGTGGCCAATGCCTTTCCGGTGACCAGCTCGGTGGCGCCGCTCATTTCGAGTGGCAAACAGATCAATAGCGGGGCCGCCGGCGTGGCTTCGGCGATCGGCTGGAGCACCGGCAACAATTCGGTCTCGGCGGTCATCGAGATGCTCGAGCGGACCGGCCTGATGCGAACGCTTGCCGAGCCCAATTTGACGGCTTTGTCGGGCGAGACCGCGAAGTTCCTTGCCGGCGGCGAATTCCCGATCCCGGTCGCCGGCGAGTTCAACCAGATCAAGGTCGAATTCAAGTCGTTCGGCGTCAGCACGACTTTCAAGCCTCTGGTGCTGAGCGACGGGCGCATCAGCCTCGCGATCGGCGCCGAGGTGAGCGAGCTCTCGACAGAGGGTGCCGTCACCATAAACGGCATCTCGATTCCCGCCCTCAAGGTTCGGCGGGCTGAGACGACGCTCGAGATGCCGAGCGGCGGCACGCTCGCGATGGCGGGAATGCTTTCGGATGATACGCGCCAGAGCGTCGAAGGCGTGCCTGGCCTGAAGAATGTGCCTGTGCTCGGCCAGCTCTTCCGCTCGAACGACTATCGCCGCCGCGAAACCGAGCTCGTCATCCTCGTCACGCCCTACATCGCGACGCACATGTCAAAGACCGAGGCCGCACGGCCCGACAAAGGCTTTGCGCCGACGAGCGACCTGAAGAGCATCTTCTTCGGCCACCTGAACCGCCTCTACGGCCCGATTGCCGGTCCGCTTCCCGAGGGTGAGTTCGGCTTCATCATTGCCTATCCCGATGCGGGCACGAAAGGCTGA
PROTEIN sequence
Length: 484
MIIAFGGGAAMAQGRDAASFGDEPGHRSYLRVPANTPLPATRRITIGADKSMLVELPVDLDNVLISNPEVVNAVVKSQRQVYLLAKDQGEANAFFMGPNGQKILLLEVVVARDLSALNEALHRLLPGSKIAVEPMGDQVVLTGSVMTPVDANRAAEIATRAMKKKDSVINMLTVAEPTKEQVLLKVTVAEMQRDALRRLGVDFPNAVLQSGNFTFQKIVANAFPVTSSVAPLISSGKQINSGAAGVASAIGWSTGNNSVSAVIEMLERTGLMRTLAEPNLTALSGETAKFLAGGEFPIPVAGEFNQIKVEFKSFGVSTTFKPLVLSDGRISLAIGAEVSELSTEGAVTINGISIPALKVRRAETTLEMPSGGTLAMAGMLSDDTRQSVEGVPGLKNVPVLGQLFRSNDYRRRETELVILVTPYIATHMSKTEAARPDKGFAPTSDLKSIFFGHLNRLYGPIAGPLPEGEFGFIIAYPDAGTKG*