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SCN18_10_11_15_R1_P_scaffold_2641_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1..750

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 246.0
  • Bit_score: 268
  • Evalue 8.70e-69
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SNU4_STRM5 similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 252.0
  • Bit_score: 263
  • Evalue 2.00e-67
exodeoxyribonuclease V subunit gamma similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 252.0
  • Bit_score: 263
  • Evalue 5.70e-68

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GAGCATTCCTCGCTGCAGCAGCAGGTGCTCGCCGCCCTGCTGGAAGGCCGCGGGCAAGGCCTGTACGAGCGCCTGCGCGCGCGCGCCCTGCTGCCCTCCGGTGCGCTCGGCCGGCAGCAGTTCGAGCAGCTGCTCGGGCGCATCCGGCCGTGTGCGGAGACGTTCGCGCACTGGTACGACGGCGCGCCGCTGCAGTCGCAGCGGCTGGAAGTGGCGATCGACGGCATCACCGTGCACGGCCGCATCGCACAGATTCATCCACAGGGCCTGGCGCGCCTGCAGGCCGGTGCGCCGGGCGTGGCCTGGGTGCTGCGCAGCGGCCTGGACTGGCTGCTGGCCAATGCCGCCGGCGTGCCACTGCCCCTGCTGCAGTTCATTGATGCCGGCGATGGCGGTTTCGGTCCGCACGTCCTGCCGCCGCCATCCGCTGAACAGGCCAGGTCGGCCCTCAAAGCCTTGCTGCAGTTGCGCTGGCAGGGGCTGCAGGCGCCACTGCCGTTTGCCCCGTACACCGGCTGGGCGATCTACAACGCCGATCCGGACAAGCGCGAAAAGGCTGCGCGCGAGAAGTGGTACGGCAGCGAACGCAGCTGGGGCGAGCGCGACGGTGAAGCCCTGCAACTGGCCCTGCGCGGCGCCGATCCGTTCGCCGACGCGGCCACTACCAACAGATTTATCCACAACAGCCTGTCGATATTCACCGCGCTGCGCGAGGGCCGGGTACTGGCCCGGACGGAGATGCAGGCATGA
PROTEIN sequence
Length: 250
EHSSLQQQVLAALLEGRGQGLYERLRARALLPSGALGRQQFEQLLGRIRPCAETFAHWYDGAPLQSQRLEVAIDGITVHGRIAQIHPQGLARLQAGAPGVAWVLRSGLDWLLANAAGVPLPLLQFIDAGDGGFGPHVLPPPSAEQARSALKALLQLRWQGLQAPLPFAPYTGWAIYNADPDKREKAAREKWYGSERSWGERDGEALQLALRGADPFADAATTNRFIHNSLSIFTALREGRVLARTEMQA*