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SCN18_10_11_15_R1_P_scaffold_2641_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 747..2555

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 612.0
  • Bit_score: 710
  • Evalue 1.20e-201
exodeoxyribonuclease V subunit beta n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E048B8 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 602.0
  • Bit_score: 676
  • Evalue 1.80e-191
exodeoxyribonuclease V subunit beta similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 604.0
  • Bit_score: 658
  • Evalue 1.50e-186

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGAACGCCGCCGCGCCCGTGGCCGACCCGTATCTCGACCTGCCGCTGGACGGCCTGCGCCTGATCGAGGCCAGCGCCGGCACCGGCAAGACCTTCACCCTGGCCACGCTGTTCACCCGGCTGGTGGTCGAACAGGGCCTGCGCATGGGCCAGATCCTGGCGGTCACGTTCACCGACGCGGCGACGCAGGAACTGCGCAAGCGCATCCGCGAGCGCCTGGACCTGGCCGCGCGGCTGGCGGACACCGCGCCGGCCGAAGGCGACAGCCCGGAAGCCGTGCTCACCCGCGCCATCCTGCACCGCCACCTGCAGCAGGGCGCGGAAAGCGCCGCGCAGCTGGCCCGGCGCCTGCGCATCGCCGCCGAGGAAACCGACCTGGCGGCGATCTTCACCATCCACGGCTTCTGCACCCGCGTGCTGGGCGAACACGCGCTGGAGAGCGGCCACAGCTTCGCCGCGCCGGAACTGCTGACCAATACCCGCCAGCTGCATGCCGGACTGGCCGCCGACCTGTGGCGCCTGCATGCCGGACGCGGCGAGTCGCTGGAAGCGCTGCTGGGCCTGTGGAAAACCCCCGAGGCGCTGGCCGCCGACCTGCCGGTGCTGGTCGCCGACCTGCCGCTGCTGCCGGCATTGCCGCCGGCGCCGCTGGAAGAGGCCCGCCCGCTGCGCGACGCCGCCGCCCGGCGCCTGGCCGAAGGGCTGGCCACGCACGGCGAGGCCTACCTGCAGCAGCTGCGCGCCGCGCTGGAAGGCGGCGTGCTCAACAAGGCCAGCTACAAGGCCGACTGGATCGAGCCGCTGTTCCAGCAACTGCTGCACTGGGCGCGCCATCCCGATCCGGCCGCCGCGCTGGACGAGCGGCTGGAGCGGCTCACCCTGGAAGCACTCACCGCCAAGACCCTCAAGGCCAGGGCCGGCAGTACCCCGGTCTCGCCGCTGCAGCCGTTGATCGCCGATTACGTGCAGGCATTGGCCCGCTTCCACGCCTGGCGCCGGCAGCAGTCCATCGTCCTGCTGCACCAACTGCGCGATGAAGCCCGCCAGCGCCTGGCGCGGCACAAGCTGCAGTACCGGGTGCAGACCTACGACGACCTGATCGACGGCGTGCACGCCGCGCTGGACGGCGAGGGCGGCGCCACGCTCGCCGCGAGGTTGCGTGCGCAGTACCGCTTCGCCCTGGTGGACGAATTCCAGGACACCGACCCGCGCCAGTGGGACATCTTCCGCCGCGTGTTCGCCGAGCCGGCCGGGGACGCCGCGCTGTTCCTGATCGGCGATCCCAAGCAGGCCATCTACGGTTTCCGTGGCGGCGACGTGCATACCTACCTGCAGGCCCGTGAGCGGGCCGCCGAGGCGCCGCGGCTGGCGCACAACTTCCGCTCGCGCCCGGCGCTGCTGCGCGCGATCGACGCGCTGTACGCCAACGCCGGCGAACAGGCCTTCCTCGACCCGCGCATCCGCTTCGAGCCGGTGCAACCGGGCAGCAAGCGCAGCGACGCCGACTACCTGCTCGATGGCGTCCCGGCCCCGGCGCTGACCCTGCACCTCATCGATGCCGACGACGAAGGCAAGCCGCTCAAGGCCGACGACTCGCGCCACGCTGCCACCCTGGCCTGCGTGGCCGACATCCACCGCGTGCTGTCCGCCGCACGCCAGGACAGGGCGCGGGTCGATGGTCGCCCGCTGCGCCCGGGTGACATCGCCGTGCTGGTGCGCTCGCACCGCGAGGCCACGCGCATCCAGCAGGCGCTGGCGGCGGCGGCGATCCCGGCGGTCGCCGCCGGCCGCCACAGCCTGTTCTCCACC
PROTEIN sequence
Length: 603
MNAAAPVADPYLDLPLDGLRLIEASAGTGKTFTLATLFTRLVVEQGLRMGQILAVTFTDAATQELRKRIRERLDLAARLADTAPAEGDSPEAVLTRAILHRHLQQGAESAAQLARRLRIAAEETDLAAIFTIHGFCTRVLGEHALESGHSFAAPELLTNTRQLHAGLAADLWRLHAGRGESLEALLGLWKTPEALAADLPVLVADLPLLPALPPAPLEEARPLRDAAARRLAEGLATHGEAYLQQLRAALEGGVLNKASYKADWIEPLFQQLLHWARHPDPAAALDERLERLTLEALTAKTLKARAGSTPVSPLQPLIADYVQALARFHAWRRQQSIVLLHQLRDEARQRLARHKLQYRVQTYDDLIDGVHAALDGEGGATLAARLRAQYRFALVDEFQDTDPRQWDIFRRVFAEPAGDAALFLIGDPKQAIYGFRGGDVHTYLQARERAAEAPRLAHNFRSRPALLRAIDALYANAGEQAFLDPRIRFEPVQPGSKRSDADYLLDGVPAPALTLHLIDADDEGKPLKADDSRHAATLACVADIHRVLSAARQDRARVDGRPLRPGDIAVLVRSHREATRIQQALAAAAIPAVAAGRHSLFST