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SCN18_13_7_16_R2_B_scaffold_1876

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R2_B_scaffold_1876_1
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..2245)
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Rhodococcus erythropolis DN1 RepID=T5I377_RHOER
Uncharacterized protein {ECO:0000313|EMBL:EQM32306.1}; TaxID=1381122 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
hypothetical protein
SCN18_13_7_16_R2_B_scaffold_1876_2
unknown

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comp(2242..2595)
DNA (354bp) protein (118aa)

This feature has no annotations

SCN18_13_7_16_R2_B_scaffold_1876_3
unknown

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3099..3239
DNA (141bp) protein (47aa)

This feature has no annotations

SCN18_13_7_16_R2_B_scaffold_1876_4
unknown

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comp(3395..3619)
DNA (225bp) protein (75aa)

This feature has no annotations

SCN18_13_7_16_R2_B_scaffold_1876_5
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3673..4161)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003807E6E
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
smpB; SsrA-binding protein
SCN18_13_7_16_R2_B_scaffold_1876_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4195..4554)
DNA (360bp) protein (120aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
ATP-dependent DNA ligase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L744_9ACTO
ATP-dependent DNA ligase {ECO:0000313|EMBL:CCH19641.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
SCN18_13_7_16_R2_B_scaffold_1876_7
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4563..4955)
DNA (393bp) protein (131aa)
Putative oxidoreductase n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5TWQ7_9ACTO
Putative oxidoreductase {ECO:0000313|EMBL:GAB37915.1}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
F420-dependent protein
SCN18_13_7_16_R2_B_scaffold_1876_8
SCNPILOT_EXPT_1000_BF_Devosia_65_23, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4966..5574)
DNA (609bp) protein (203aa)
Regulatory protein TetR n=1 Tax=Frankia sp. CN3 RepID=G6H5P4_9ACTO
TetR family transcriptional regulator {ECO:0000313|EMBL:AKH82271.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
transcriptional regulator
SCN18_13_7_16_R2_B_scaffold_1876_9
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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5640..7205
DNA (1566bp) protein (522aa)
major facilitator transporter n=1 Tax=Patulibacter americanus RepID=UPI0003B5C15A
Multidrug resistance protein B {ECO:0000313|EMBL:EHN11674.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
EmrB/QacA subfamily drug resistance transporter
SCN18_13_7_16_R2_B_scaffold_1876_10
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7202..7693)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000369EE64
Acetyltransferase {ECO:0000313|EMBL:EWM10177.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
acetyltransferase
Displaying 10 items

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