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SCN18_13_7_16_R2_B_scaffold_4988

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R2_B_scaffold_4988_1
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

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comp(3..404)
DNA (402bp) protein (134aa)
SCN18_13_7_16_R2_B_scaffold_4988_2
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(543..1040)
DNA (498bp) protein (166aa)
transcription elongation factor GreA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B57C1B
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCN18_13_7_16_R2_B_scaffold_4988_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1184..2083
DNA (900bp) protein (300aa)
Mycothiol S-conjugate amidase {ECO:0000256|HAMAP-Rule:MF_01482}; EC=3.5.1.115 {ECO:0000256|HAMAP-Rule:MF_01482};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
GlcNAc-PI de-N-acetylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B370A5
mycothiol conjugate amidase Mca
SCN18_13_7_16_R2_B_scaffold_4988_4
unknown

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2089..2388
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B37FDA
SCN18_13_7_16_R2_B_scaffold_4988_5
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2372..3349)
DNA (978bp) protein (326aa)
Helix-turn-helix type 11 domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3I5_SPHTD
helix-turn-helix type 11 domain-containing protein
Helix-turn-helix type 11 domain-containing protein {ECO:0000313|EMBL:AHH94833.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCN18_13_7_16_R2_B_scaffold_4988_6
unknown

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3430..3546
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 6 items

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