ggKbase home page

SCN18_13_7_16_R2_B_scaffold_2569

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_13_7_16_R2_B_scaffold_2569_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..313
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Mycobacterium avium subsp. silvaticum ATCC 49884 RepID=V7K037_MYCAV
Polyketide cyclase {ECO:0000313|EMBL:KKB98543.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;"
hypothetical protein
SCN18_13_7_16_R2_B_scaffold_2569_trna_1
unknown

Not on your lists

comp(352..434)
DNA (83bp)
transferRNA Leu
SCN18_13_7_16_R2_B_scaffold_2569_2
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

597..1478
DNA (882bp) protein (294aa)
signal peptide protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4CA58
Signal peptide protein {ECO:0000313|EMBL:KGH48654.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
Oxoglutarate dehydrogenase inhibitor
SCN18_13_7_16_R2_B_scaffold_2569_3
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1495..1968
DNA (474bp) protein (158aa)
membrane protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6869B
FHA domain-containing protein
Signal peptide protein {ECO:0000313|EMBL:KFZ83465.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
SCN18_13_7_16_R2_B_scaffold_2569_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1993..3408
DNA (1416bp) protein (472aa)
protein serine/threonine phosphatase (EC:3.1.3.16)
serine/threonine phosphatase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B42D39
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EXG79019.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
SCN18_13_7_16_R2_B_scaffold_2569_5
SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3405..4808
DNA (1404bp) protein (468aa)
cell division protein FtsW n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6DB43
rodA; cell elongation-specific peptidoglycan biosynthesis regulator RodA
CELL DIVISION PROTEIN {ECO:0000313|EMBL:CCF60852.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
SCN18_13_7_16_R2_B_scaffold_2569_6
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4805..5839
DNA (1035bp) protein (345aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Cell elongation-specific peptidoglycan D,D-transpeptidase {ECO:0000313|EMBL:ABK51796.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABK51796.1};; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
cell division protein FtsI n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6E692
Displaying 7 items

View Taxonomy