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SCN18_14_9_16_R4_B_scaffold_4072

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_4072_1
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..111
DNA (111bp) protein (37aa)
XRE family transcriptional regulator n=1 Tax=Leucobacter chromiiresistens RepID=UPI0002629A7E
Leucobacter komagatae strain VKM ST2845 L_komagatae_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52475.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
two-component system regulatory protein
SCN18_14_9_16_R4_B_scaffold_4072_2
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(213..812)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034A2742
DNA modification methylase {ECO:0000313|EMBL:EYT55879.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_4072_3
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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994..1494
DNA (501bp) protein (167aa)
CarD family transcriptional regulator n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037F66EE
Leucobacter komagatae strain VKM ST2845 L_komagatae_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52476.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
transcriptional regulator, CarD-like regulator
SCN18_14_9_16_R4_B_scaffold_4072_4
SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, SCNPILOT_EXPT_750_BF_Actinomycetales_70_150, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1561..2841
DNA (1281bp) protein (427aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034D3B8A
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SCN18_14_9_16_R4_B_scaffold_4072_5
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2838..3338
DNA (501bp) protein (167aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
ispDF; bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037CC610
SCN18_14_9_16_R4_B_scaffold_4072_6
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(3342..3758)
DNA (417bp) protein (139aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
twitching motility protein PilT n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C6CD0
hypothetical protein
Displaying 6 items

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