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SCN18_14_9_16_R4_B_Actinobacteria_68_6

In projects: SCN18_14_9_16_R4_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated

Consensus taxonomy: Actinobacteria  →  Actinobacteria  →  Bacteria

Description

Extracted from CN18_14_9_16_R4_B_concoct_035

Displaying items 51-100 of 844 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_14_9_16_R4_B_scaffold_7862
Genus: Microbacterium (50%)
4 2093 bp 67.80 4.87 88.29
SCN18_14_9_16_R4_B_scaffold_5796
Order: Micrococcales (66.67%)
3 2888 bp 71.78 4.88 88.40
SCN18_14_9_16_R4_B_scaffold_9703
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (66.67%)
3 1691 bp 66.53 4.88 89.59
SCN18_14_9_16_R4_B_scaffold_12904
Species: SCNpilot_P_inoc_Microbacterium_67_17 (50%)
2 1288 bp 66.15 4.89 85.25
SCN18_14_9_16_R4_B_scaffold_8022
Class: Actinobacteria (50%)
4 2053 bp 68.34 4.90 84.17
SCN18_14_9_16_R4_B_scaffold_13290
Species: CN-SCN_Leifsonia_139x (50%)
2 1253 bp 67.92 4.91 92.42
SCN18_14_9_16_R4_B_scaffold_6328
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (66.67%)
3 2627 bp 71.98 4.91 97.75
SCN18_14_9_16_R4_B_scaffold_4995
Order: Micrococcales (66.67%)
3 3425 bp 68.18 4.91 99.59
SCN18_14_9_16_R4_B_scaffold_7511
Genus: Microbacterium (50%)
4 2191 bp 68.83 4.93 84.62
SCN18_14_9_16_R4_B_scaffold_12699
Phylum: Actinobacteria (66.67%)
3 1308 bp 68.50 4.93 72.94
SCN18_14_9_16_R4_B_scaffold_16254
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 1032 bp 69.38 4.94 100.00
SCN18_14_9_16_R4_B_scaffold_9811
Species: Microbacterium sp. CH12i (50%)
2 1671 bp 66.91 4.94 85.10
SCN18_14_9_16_R4_B_scaffold_9646
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
2 1702 bp 69.21 4.94 91.13
SCN18_14_9_16_R4_B_scaffold_7458
Class: Actinobacteria (66.67%)
3 2210 bp 67.78 4.95 97.74
SCN18_14_9_16_R4_B_scaffold_10888
Species: CN-SCN_Microbacterium_27x (50%)
2 1512 bp 70.04 4.96 79.37
SCN18_14_9_16_R4_B_scaffold_10663
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1542 bp 65.37 4.96 97.28
SCN18_14_9_16_R4_B_scaffold_9249
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (50%)
4 1777 bp 69.56 4.98 92.01
SCN18_14_9_16_R4_B_scaffold_10103
Order: Micrococcales (66.67%)
3 1624 bp 69.40 4.99 77.59
SCN18_14_9_16_R4_B_scaffold_9130
Order: Micrococcales (66.67%)
3 1803 bp 66.28 4.99 78.37
SCN18_14_9_16_R4_B_scaffold_7812
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (50%)
2 2106 bp 69.90 4.99 77.49
SCN18_14_9_16_R4_B_scaffold_9932
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (50%)
2 1651 bp 66.69 5.00 70.87
SCN18_14_9_16_R4_B_scaffold_5849
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (50%)
2 2851 bp 63.35 5.00 94.28
SCN18_14_9_16_R4_B_scaffold_8476
Class: Actinobacteria (66.67%)
3 1945 bp 70.95 5.01 78.51
SCN18_14_9_16_R4_B_scaffold_9477
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (66.67%)
3 1734 bp 70.70 5.02 83.22
SCN18_14_9_16_R4_B_scaffold_11545
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (100%)
2 1435 bp 69.76 5.02 98.68
SCN18_14_9_16_R4_B_scaffold_10792
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 1525 bp 68.59 5.02 96.79
SCN18_14_9_16_R4_B_scaffold_8243
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (100%)
1 2001 bp 66.97 5.02 77.51
SCN18_14_9_16_R4_B_scaffold_4645
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (60%)
5 3726 bp 67.26 5.03 84.86
SCN18_14_9_16_R4_B_scaffold_11609
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (66.67%)
3 1428 bp 63.66 5.04 89.71
SCN18_14_9_16_R4_B_scaffold_15238
Species: SCNpilot_BF_INOC_Solirubrobacterales_68_7 (50%)
2 1099 bp 66.70 5.05 99.64
SCN18_14_9_16_R4_B_scaffold_16611
Species: SCNpilot_P_inoc_Microbacterium_67_17 (50%)
2 1010 bp 70.30 5.05 86.14
SCN18_14_9_16_R4_B_scaffold_11090
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 (100%)
1 1486 bp 67.03 5.05 99.93
SCN18_14_9_16_R4_B_scaffold_7492
Species: CN-SCN_Microbacterium_18x (75%)
4 2198 bp 72.47 5.05 99.09
SCN18_14_9_16_R4_B_scaffold_5105
Class: Actinobacteria (60%)
5 3349 bp 65.93 5.06 90.65
SCN18_14_9_16_R4_B_scaffold_14064
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (100%)
2 1184 bp 66.98 5.07 100.08
SCN18_14_9_16_R4_B_scaffold_9584
Class: Actinobacteria (66.67%)
3 1714 bp 74.45 5.08 92.42
SCN18_14_9_16_R4_B_scaffold_11967
Order: Micrococcales (100%)
3 1387 bp 69.72 5.08 85.87
SCN18_14_9_16_R4_B_scaffold_14892
Species: Leucobacter sp. UCD-THU (50%)
2 1123 bp 67.32 5.08 97.77
SCN18_14_9_16_R4_B_scaffold_16797
Species: Mobilicoccus pelagius (100%)
1 1001 bp 62.14 5.09 99.80
SCN18_14_9_16_R4_B_scaffold_9302
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
3 1768 bp 65.27 5.09 96.21
SCN18_14_9_16_R4_B_scaffold_8991
Genus: Microbacterium (66.67%)
3 1828 bp 71.28 5.09 85.18
SCN18_14_9_16_R4_B_scaffold_9436
Species: CN-SCN_Microbacterium_18x (66.67%)
3 1740 bp 65.46 5.09 94.48
SCN18_14_9_16_R4_B_scaffold_6349
Genus: Microbacterium (66.67%)
3 2616 bp 68.00 5.10 96.67
SCN18_14_9_16_R4_B_scaffold_5022
Class: Actinobacteria (50%)
6 3407 bp 67.80 5.11 93.87
SCN18_14_9_16_R4_B_scaffold_11285
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (66.67%)
3 1465 bp 65.46 5.12 80.48
SCN18_14_9_16_R4_B_scaffold_8419
Species: SCNPILOT_EXPT_750_BF_Actinomycetales_70_150 (66.67%)
3 1959 bp 69.93 5.13 94.33
SCN18_14_9_16_R4_B_scaffold_11078
Genus: Microbacterium (66.67%)
3 1487 bp 68.86 5.14 95.43
SCN18_14_9_16_R4_B_scaffold_10843
Genus: Microbacterium (66.67%)
3 1518 bp 69.57 5.14 98.22
SCN18_14_9_16_R4_B_scaffold_6066
Species: CN-SCN_Leifsonia_139x (50%)
4 2744 bp 66.47 5.14 90.52
SCN18_14_9_16_R4_B_scaffold_7519
Species: CN-SCN_Leifsonia_139x (50%)
2 2189 bp 70.31 5.14 95.80
Displaying items 51-100 of 844 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.