ggKbase home page

SCN18_26_2_15_R1_B_scaffold_5460

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_5460_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..653)
DNA (651bp) protein (217aa)
Beta-lactamase-like n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NCV4_RHOPA
beta-lactamase-like protein
Beta-lactamase {ECO:0000313|EMBL:KIZ37043.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
SCN18_26_2_15_R1_B_scaffold_5460_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

735..1040
DNA (306bp) protein (102aa)
Transcriptional regulator, ArsR family n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5ASC3_METEA
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_26_2_15_R1_B_scaffold_5460_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1078..1230
DNA (153bp) protein (51aa)
SCN18_26_2_15_R1_B_scaffold_5460_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1464..2279
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CBJ6_METED
Conserved protein {ECO:0000313|EMBL:GAK44646.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_5460_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2368..3084
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y6K1_LEPCP
Uncharacterized protein {ECO:0000313|EMBL:KHQ53620.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_5460_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3163..3606
DNA (444bp) protein (148aa)
Putative thioredoxin n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TAI6_9BRAD
Putative thioredoxin {ECO:0000313|EMBL:CCE03463.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
thioredoxin
SCN18_26_2_15_R1_B_scaffold_5460_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3642..3998
DNA (357bp) protein (119aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZB83_AZOL4
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_5460_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4096..4743
DNA (648bp) protein (216aa)
Methyltransferase type 11 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUP9_SIDLE
methyltransferase type 11
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_26_2_15_R1_B_scaffold_5460_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5067..5444
DNA (378bp) protein (126aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SXH6_9BRAD
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
camphor resistance protein CrcB
SCN18_26_2_15_R1_B_scaffold_5460_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5444..5683
DNA (240bp) protein (80aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental samples.;" source="Methanoculleus sp. CAG:1088.;"
Phosphoglycerate mutase (EC:5.4.2.1)
phosphoglyceromutase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EB2F0D
Displaying 10 items

View Taxonomy