ggKbase home page

SCN18_26_2_15_R1_B_scaffold_6697

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_6697_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..769)
DNA (768bp) protein (256aa)
Tail sheath protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z3L7_9NEIS
Phage tail sheath protein {ECO:0000313|EMBL:KEZ11986.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
tail sheath protein
SCN18_26_2_15_R1_B_scaffold_6697_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(775..1101)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=2 Tax=Nitrosococcus oceani RepID=Q3JA00_NITOC
hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AJQ97528.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" source="Gynuella sunshinyii YC6258.;"
SCN18_26_2_15_R1_B_scaffold_6697_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1504..2502
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
tRNA-dihydrouridine synthase A n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GH70_9RHIZ
tRNA-dihydrouridine synthase A
SCN18_26_2_15_R1_B_scaffold_6697_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2588..3571
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375D9C3
putative Na+-dependent transporter
Putative Na+-dependent transporter {ECO:0000313|EMBL:CCA90944.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCN18_26_2_15_R1_B_scaffold_6697_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3576..3746)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZFB6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAD60170.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
hypothetical protein
SCN18_26_2_15_R1_B_scaffold_6697_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3743..4417)
DNA (675bp) protein (225aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035CA47C
cobV; Cobalamin-5-phosphate synthase
SCN18_26_2_15_R1_B_scaffold_6697_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4534..4725
DNA (192bp) protein (64aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003695787
cobT; Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Displaying 7 items

View Taxonomy