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SCN18_26_2_15_R1_B_scaffold_7724

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R1_B_scaffold_7724_1
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003721B0C
dadA; d-amino acid dehydrogenase subunit
D-amino acid dehydrogenase subunit {ECO:0000313|EMBL:AEG72225.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
SCN18_26_2_15_R1_B_scaffold_7724_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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478..1155
DNA (678bp) protein (226aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=Kaistia granuli RepID=UPI0003674BEB
SCN18_26_2_15_R1_B_scaffold_7724_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1148..1852
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378E4C9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ70018.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_26_2_15_R1_B_scaffold_7724_4
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1881..3188
DNA (1308bp) protein (436aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
adenylosuccinate lyase (EC:4.3.2.2)
adenylosuccinate lyase n=1 Tax=Kaistia granuli RepID=UPI00037FA34D
SCN18_26_2_15_R1_B_scaffold_7724_5
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3255..3731
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037FC7B2
glutathione peroxidase
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_26_2_15_R1_B_scaffold_7724_6
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3811..4071)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003779BBF
Uncharacterized protein {ECO:0000313|EMBL:ESQ92405.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
major intrinsic protein
SCN18_26_2_15_R1_B_scaffold_7724_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4119..4400)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003779BBF
AraC family regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCN18_26_2_15_R1_B_scaffold_7724_8
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4476..5261)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003624613
Hydroxyacid aldolase {ECO:0000313|EMBL:KFG67667.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
HpcH/HpaI aldolase
SCN18_26_2_15_R1_B_scaffold_7724_9
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5283..5606)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003776AA9
Putative uncharacterized protein {ECO:0000313|EMBL:EEE45658.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
HpcH/HpaI aldolase
SCN18_26_2_15_R1_B_scaffold_7724_10
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5869..6663
DNA (795bp) protein (265aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Kaistia granuli RepID=UPI0003761C98
phosphoribosylaminoimidazolesuccinocarboxamide synthase
SCN18_26_2_15_R1_B_scaffold_7724_11
unknown

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6690..7286
DNA (597bp) protein (199aa)

This feature has no annotations

SCN18_26_2_15_R1_B_scaffold_7724_12
unknown

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7388..7654
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 12 items

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