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SCN18_26_2_15_R2_B_scaffold_5107

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_5107_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..493)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E4C98
glutamate--ammonia ligase
Glutamate--ammonia ligase {ECO:0000313|EMBL:ACM06870.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
SCN18_26_2_15_R2_B_scaffold_5107_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(531..1316)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000376E372
3-oxoacyl-ACP reductase
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_26_2_15_R2_B_scaffold_5107_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1331..2098)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037E80E8
Putative oxidoreductase {ECO:0000313|EMBL:GAC84997.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
SCN18_26_2_15_R2_B_scaffold_5107_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2351..3115
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000381C5FA
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX59501.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
branched-chain amino acid ABC transporter ATP-binding protein
SCN18_26_2_15_R2_B_scaffold_5107_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3140..4288
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000375B613
extracellular ligand-binding receptor
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCN18_26_2_15_R2_B_scaffold_5107_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4288..5004
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003812E7F
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCV07771.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
high-affinity branched-chain amino acid transport ATP-binding protein
SCN18_26_2_15_R2_B_scaffold_5107_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5001..5903
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C1D1A
branched-chain amino acid ABC transporter, permease protein
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AII86734.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;"
SCN18_26_2_15_R2_B_scaffold_5107_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5900..6358
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000381CEB0
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:CDX20913.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
high-affinity branched-chain amino acid transport system permease
Displaying 8 items

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