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SCN18_26_2_15_R2_B_scaffold_4222

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_4222_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..784)
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J779_HYPSM
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CCB65997.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_4222_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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964..2163
DNA (1200bp) protein (400aa)
Extensin family protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J780_HYPSM
extensin
Extensin family protein {ECO:0000313|EMBL:CCB65998.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_4222_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2311..3366
DNA (1056bp) protein (352aa)
hemB; porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:CCB65999.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J781_HYPSM
SCN18_26_2_15_R2_B_scaffold_4222_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3204..3899)
DNA (696bp) protein (232aa)
ABC transporter related protein n=1 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q1J5_CALOW
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADQ04729.1}; TaxID=632518 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
SCN18_26_2_15_R2_B_scaffold_4222_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3896..4690)
DNA (795bp) protein (265aa)
Monosaccharide-transporting ATPase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GIZ8_9FIRM
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCN18_26_2_15_R2_B_scaffold_4222_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4745..5944)
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003706A77
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEZ03299.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
extracellular ligand-binding receptor
SCN18_26_2_15_R2_B_scaffold_4222_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6014..6592)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036BDC2F
Uncharacterized protein {ECO:0000313|EMBL:ETW94608.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_4222_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6609..7436)
DNA (828bp) protein (276aa)
Chitin deacetylase 1 n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6Z843_9ALTE
Allantoinase {ECO:0000313|EMBL:ETW95094.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
allantoinase
Displaying 8 items

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