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SCN18_26_2_15_R2_B_scaffold_2241

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_2241_1
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..935)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BDK0_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK58556.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_26_2_15_R2_B_scaffold_2241_2
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1005..1889)
DNA (885bp) protein (295aa)
Formate/nitrite transporter n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JRA5_HYPDA
formate/nitrite transporter
Formate/nitrite transporter {ECO:0000313|EMBL:ADJ24090.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCN18_26_2_15_R2_B_scaffold_2241_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1889..2572)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBC0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63806.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2241_4
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2646..4370)
DNA (1725bp) protein (575aa)
Glycosyl transferase family 39 n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBB9_HYPSM
glycosyl transferase
Glycosyl transferase family 39 {ECO:0000313|EMBL:CCB63805.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2241_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4605..5054
DNA (450bp) protein (150aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Orotate phosphoribosyltransferase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBB8_HYPSM
SCN18_26_2_15_R2_B_scaffold_2241_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5108..5779)
DNA (672bp) protein (224aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:CCB63803.1}; EC=3.1.1.45 {ECO:0000313|EMBL:CCB63803.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Carboxymethylenebutenolidase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBB7_HYPSM
SCN18_26_2_15_R2_B_scaffold_2241_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5930..7519)
DNA (1590bp) protein (530aa)
pck; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CCB63802.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JBB6_HYPSM
SCN18_26_2_15_R2_B_scaffold_2241_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7989..8693
DNA (705bp) protein (235aa)
Two-component response regulator ChvI n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAK7_HYPSM
chvI; Two-component response regulator ChvI
Two-component response regulator ChvI {ECO:0000313|EMBL:CCB63800.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2241_9
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8720..10567
DNA (1848bp) protein (616aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAK6_HYPSM
integral membrane sensor signal transduction histidine kinase
SCN18_26_2_15_R2_B_scaffold_2241_10
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10701..11015
DNA (315bp) protein (105aa)
HPr kinase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAK5_HYPSM
HPr kinase
HPr kinase {ECO:0000313|EMBL:CCB63798.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_26_2_15_R2_B_scaffold_2241_11
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11135..11536
DNA (402bp) protein (134aa)
PTS system subfamily mannose/fructose-specific IIA component (EC:2.7.1.69)
Putative PTS system subfamily mannose/fructose-specific IIA component {ECO:0000313|EMBL:CCB63797.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCB63797.1};; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putative PTS system subfamily mannose/fructose-specific IIA component n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAK4_HYPSM
SCN18_26_2_15_R2_B_scaffold_2241_12
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11546..12529
DNA (984bp) protein (328aa)
carbohydrate binding family 6 id=7716831 bin=BACIGN_2 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
Displaying 12 items

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