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SCN18_26_2_15_R2_B_Rhizobiales_61_8

In projects: SCN18_26_2_15_R2_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Extracted from SCN18_26_2_15_R2_B_concoct_004

Displaying items 501-550 of 770 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R2_B_scaffold_10625
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
6 6081 bp 60.50 7.70 100.54
SCN18_26_2_15_R2_B_scaffold_33822
Order: Rhizobiales (66.67%)
3 1286 bp 62.75 7.70 59.02
SCN18_26_2_15_R2_B_scaffold_1945
Order: Rhizobiales (100%)
16 14182 bp 61.03 7.70 88.59
SCN18_26_2_15_R2_B_scaffold_26952
Species: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial (100%)
1 1576 bp 59.96 7.71 82.04
SCN18_26_2_15_R2_B_scaffold_5107
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
8 6359 bp 59.11 7.71 94.97
SCN18_26_2_15_R2_B_scaffold_2828
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
11 10254 bp 61.66 7.71 92.92
SCN18_26_2_15_R2_B_scaffold_14386
Order: Rhizobiales (100%)
3 2706 bp 61.35 7.71 82.04
SCN18_26_2_15_R2_B_scaffold_7930
Order: Rhizobiales (100%)
5 4409 bp 59.81 7.72 86.48
SCN18_26_2_15_R2_B_scaffold_5748
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
7 5789 bp 61.05 7.72 83.07
SCN18_26_2_15_R2_B_scaffold_27361
Order: Rhizobiales (75%)
4 1554 bp 59.97 7.72 87.45
SCN18_26_2_15_R2_B_scaffold_10005
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
6 3628 bp 60.20 7.73 90.88
SCN18_26_2_15_R2_B_scaffold_6916
Order: Rhizobiales (85.71%)
7 4966 bp 60.01 7.73 99.07
SCN18_26_2_15_R2_B_scaffold_7337
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
5 4714 bp 59.74 7.73 86.11
SCN18_26_2_15_R2_B_scaffold_11474
Genus: Hyphomicrobium (50%)
4 3254 bp 59.93 7.74 72.65
SCN18_26_2_15_R2_B_scaffold_28660
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (50%)
2 1492 bp 60.05 7.74 87.47
SCN18_26_2_15_R2_B_scaffold_30941
Species: Hyphomicrobium denitrificans (50%)
2 1396 bp 60.67 7.74 100.79
SCN18_26_2_15_R2_B_scaffold_29990
Species: Hyphomicrobium sp. MC1 (50%)
2 1435 bp 59.37 7.74 75.47
SCN18_26_2_15_R2_B_scaffold_4176
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
7 7500 bp 59.68 7.74 86.72
SCN18_26_2_15_R2_B_scaffold_4498
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
7 7029 bp 60.98 7.75 90.44
SCN18_26_2_15_R2_B_scaffold_28715
Order: Rhizobiales (66.67%)
3 1490 bp 62.48 7.75 88.19
SCN18_26_2_15_R2_B_scaffold_44164
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (50%)
2 1005 bp 61.09 7.76 71.64
SCN18_26_2_15_R2_B_scaffold_11203
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
4 3320 bp 60.03 7.77 96.96
SCN18_26_2_15_R2_B_scaffold_15617
Species: Bradyrhizobium sp. DFCI-1 (50%)
4 2528 bp 57.75 7.77 83.54
SCN18_26_2_15_R2_B_scaffold_6168
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
3 5463 bp 60.77 7.77 96.71
SCN18_26_2_15_R2_B_scaffold_1895
Order: Rhizobiales (64.71%)
17 14470 bp 60.57 7.77 82.58
SCN18_26_2_15_R2_B_scaffold_15647
Order: Rhizobiales (50%)
4 2523 bp 61.47 7.79 93.22
SCN18_26_2_15_R2_B_scaffold_14684
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
3 2658 bp 61.59 7.79 93.57
SCN18_26_2_15_R2_B_scaffold_15126
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
4 2595 bp 60.73 7.80 98.96
SCN18_26_2_15_R2_B_scaffold_6123
Order: Rhizobiales (71.43%)
7 5502 bp 61.03 7.80 90.73
SCN18_26_2_15_R2_B_scaffold_3205
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
10 9321 bp 58.56 7.80 82.04
SCN18_26_2_15_R2_B_scaffold_7229
Order: Rhizobiales (75%)
4 4778 bp 61.80 7.82 87.53
SCN18_26_2_15_R2_B_scaffold_8799
Order: Rhizobiales (80%)
5 4045 bp 62.35 7.82 86.63
SCN18_26_2_15_R2_B_scaffold_2550
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
11 11242 bp 60.95 7.82 84.97
SCN18_26_2_15_R2_B_scaffold_7629
Order: Rhizobiales (83.33%)
6 4565 bp 61.73 7.82 83.72
SCN18_26_2_15_R2_B_scaffold_16724
Genus: Mesorhizobium (66.67%)
3 2378 bp 61.94 7.82 94.87
SCN18_26_2_15_R2_B_scaffold_29907
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 1438 bp 59.39 7.82 98.47
SCN18_26_2_15_R2_B_scaffold_4253
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
9 7394 bp 61.01 7.83 94.01
SCN18_26_2_15_R2_B_scaffold_6100
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
8 5517 bp 60.30 7.83 92.55
SCN18_26_2_15_R2_B_scaffold_14289
Species: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial (66.67%)
3 2720 bp 61.51 7.83 81.40
SCN18_26_2_15_R2_B_scaffold_5672
Order: Rhizobiales (71.43%)
7 5846 bp 62.47 7.83 90.42
SCN18_26_2_15_R2_B_scaffold_31441
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
2 1377 bp 62.53 7.84 83.44
SCN18_26_2_15_R2_B_scaffold_6179
Order: Rhizobiales (75%)
4 5453 bp 61.69 7.84 94.24
SCN18_26_2_15_R2_B_scaffold_26053
Genus: Mesorhizobium (50%)
4 1627 bp 55.62 7.84 91.27
SCN18_26_2_15_R2_B_scaffold_6078
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
6 5539 bp 59.70 7.85 87.31
SCN18_26_2_15_R2_B_scaffold_23485
Genus: Hyphomicrobium (66.67%)
3 1778 bp 58.04 7.85 85.21
SCN18_26_2_15_R2_B_scaffold_13788
Order: Rhizobiales (80%)
5 2806 bp 62.51 7.86 90.77
SCN18_26_2_15_R2_B_scaffold_3383
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
8 8908 bp 60.80 7.86 90.73
SCN18_26_2_15_R2_B_scaffold_1405
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (90%)
20 19100 bp 60.61 7.86 82.30
SCN18_26_2_15_R2_B_scaffold_8985
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
5 3984 bp 60.27 7.87 92.77
SCN18_26_2_15_R2_B_scaffold_25800
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
3 3106 bp 59.30 7.87 89.25
Displaying items 501-550 of 770 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.