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SCN18_30_10_14_R2_B_scaffold_4093

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4093_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..564
DNA (564bp) protein (188aa)
CoA-binding n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U075_9RHOB
CoA-binding {ECO:0000313|EMBL:EAQ02706.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
SCN18_30_10_14_R2_B_scaffold_4093_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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649..2493
DNA (1845bp) protein (615aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000360D727
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDX16917.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
diguanylate cyclase/phosphodiesterase
SCN18_30_10_14_R2_B_scaffold_4093_3
unknown

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comp(2952..3173)
DNA (222bp) protein (74aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4093_4
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3214..3366)
DNA (153bp) protein (51aa)
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:CDX21967.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCN18_30_10_14_R2_B_scaffold_4093_5
SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, SCNPILOT_SOLID2_TRIM150_Phage_6, Phage

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comp(3409..3681)
DNA (273bp) protein (91aa)
UPI0003CF340E related cluster n=1 Tax=unknown RepID=UPI0003CF340E
Peptidase U35 {ECO:0000313|EMBL:ESY58954.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
HK97 family phage prohead protease
SCN18_30_10_14_R2_B_scaffold_4093_6
unknown

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comp(4243..4515)
DNA (273bp) protein (91aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4093_7
SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, SCNpilot_BF_INOC_Mobile_elements_62_12, Plasmid-like

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comp(4651..5325)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G9X7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY24310.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
methionyl-tRNA formyltransferase-like protein
SCN18_30_10_14_R2_B_scaffold_4093_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5406..6047)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9ABA2_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:KKC41007.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4093_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6068..7165)
DNA (1098bp) protein (366aa)
Oxidoreductase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JDE6_AGRRK
Putative oxidoreductase protein {ECO:0000313|EMBL:KFC69720.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
oxidoreductase
SCN18_30_10_14_R2_B_scaffold_4093_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7193..8254)
DNA (1062bp) protein (354aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQB3_9RHIZ
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EIM26155.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC transporter
SCN18_30_10_14_R2_B_scaffold_4093_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8261..8680)
DNA (420bp) protein (140aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JNW1_BURP8
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEA03327.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
Displaying 11 items

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