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SCN18_30_10_14_R2_B_scaffold_4588

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4588_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1461
DNA (1461bp) protein (487aa)
60 kDa chaperonin 4 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=CH604_RHILO
groEL; molecular chaperone GroEL
60 kDa chaperonin 4 {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein 4 {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 4 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_30_10_14_R2_B_scaffold_4588_2
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1517..2185)
DNA (669bp) protein (223aa)
Methyltransferase small n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGH0_MESOW
methyltransferase small
SAM-dependent methyltransferase {ECO:0000313|EMBL:ESY83468.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCN18_30_10_14_R2_B_scaffold_4588_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2280..2465
DNA (186bp) protein (62aa)
CsbD family protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y3S3_MESOW
Uncharacterized protein {ECO:0000313|EMBL:EXL08835.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
CsbD family protein
SCN18_30_10_14_R2_B_scaffold_4588_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2595..3872)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDX1_METS4
DNA-binding protein {ECO:0000313|EMBL:KFG66538.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4588_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4052..4933
DNA (882bp) protein (294aa)
UPI0003CECFA8 related cluster n=1 Tax=unknown RepID=UPI0003CECFA8
Cation ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX85029.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
periplasmic solute binding family protein
SCN18_30_10_14_R2_B_scaffold_4588_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4930..5724
DNA (795bp) protein (265aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ESP1_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESX12957.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
ABC transporter family protein
SCN18_30_10_14_R2_B_scaffold_4588_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5708..6508
DNA (801bp) protein (267aa)
UPI0003CDDEB7 related cluster n=1 Tax=unknown RepID=UPI0003CDDEB7
ABC transporter permease {ECO:0000313|EMBL:ESY28813.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
znuB; cation ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_4588_8
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6581..6988
DNA (408bp) protein (136aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3CF84_9RHIZ
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJN04544.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
Fur family ferric uptake regulator protein
SCN18_30_10_14_R2_B_scaffold_4588_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7040..8296
DNA (1257bp) protein (419aa)
Aminopeptidase T, Metallo peptidase, MEROPS family M29 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QK79_NITHX
peptidase M29, aminopeptidase II
Aminopeptidase T, Metallo peptidase, MEROPS family M29 {ECO:0000313|EMBL:ABE63368.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R2_B_scaffold_4588_10
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8514..9359
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003123D32
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EZQ15749.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
metallophosphoesterase
SCN18_30_10_14_R2_B_scaffold_4588_11
unknown

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comp(9206..9787)
DNA (582bp) protein (194aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4588_12
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9901..10545
DNA (645bp) protein (215aa)
S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XFX3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ96158.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4588_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10546..11199
DNA (654bp) protein (218aa)
Methyltransferase type 12 n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WZN9_OCHA4
Methyltransferase {ECO:0000313|EMBL:EXL08145.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
type 12 methyltransferase
SCN18_30_10_14_R2_B_scaffold_4588_14
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11239..12723
DNA (1485bp) protein (495aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
fumC; fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VSQ6_9RHIZ
SCN18_30_10_14_R2_B_scaffold_4588_15
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12850..13236
DNA (387bp) protein (129aa)
Putative quinol oxidase subunit n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F947_9RHIZ
Putative quinol oxidase subunit {ECO:0000313|EMBL:CCV13005.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_4588_16
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13241..13459)
DNA (219bp) protein (73aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=HIS1_RHILO
SCN18_30_10_14_R2_B_scaffold_4588_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13539..13973
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG09365.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
Displaying 17 items

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