ggKbase home page

SCN18_30_10_14_R2_B_scaffold_2855

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2855_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595..1866
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003722258
Putative membrane protein {ECO:0000313|EMBL:AID33428.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
glycosyl transferase family protein
SCN18_30_10_14_R2_B_scaffold_2855_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1888..3042
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036369A5
GtrA-like family protein {ECO:0000313|EMBL:AID33427.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
glycosyl transferase family protein
SCN18_30_10_14_R2_B_scaffold_2855_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3032..4543
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P9U2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ83849.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
glycosyl transferase family protein
SCN18_30_10_14_R2_B_scaffold_2855_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4614..5420)
DNA (807bp) protein (269aa)
lipopolysaccharide biosynthesis protein n=1 Tax=Rhizobium giardinii RepID=UPI00036654FF
lpsC; lipopolysaccharide core biosynthesis glycosyl transferase LpsC
Lipopolysaccharide core biosynthesis glycosyl transferase LpsC {ECO:0000313|EMBL:AHK44403.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCN18_30_10_14_R2_B_scaffold_2855_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5621..6298)
DNA (678bp) protein (226aa)
tyrosine/serine protein phosphatase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035F1B10
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:EJC69990.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
protein tyrosine/serine phosphatase
SCN18_30_10_14_R2_B_scaffold_2855_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6344..6742)
DNA (399bp) protein (133aa)
SCN18_30_10_14_R2_B_scaffold_2855_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6898..7575
DNA (678bp) protein (226aa)
XRE family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003763AF2
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ADV10053.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R2_B_scaffold_2855_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7562..8968
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C089B000.;"
qseC; sensor protein QseC (EC:2.7.13.3)
Histidine kinase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H1Y8_9RHIZ
SCN18_30_10_14_R2_B_scaffold_2855_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..9576)
DNA (552bp) protein (184aa)
soxG; sarcosine oxidase subunit gamma (EC:1.5.3.1)
Putative sarcosine oxidase gamma subunit {ECO:0000313|EMBL:AGG72663.1}; EC=1.5.3.1 {ECO:0000313|EMBL:AGG72663.1};; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
sarcosine oxidase subunit gamma n=1 Tax=Rhizobium meliloti RepID=UPI000360BCA6
SCN18_30_10_14_R2_B_scaffold_2855_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9569..11722)
DNA (2154bp) protein (718aa)
Sarcosine oxidase subunit alpha n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8BK44_RHIRD
Sarcosine oxidase alpha subunit {ECO:0000313|EMBL:AIH15822.1}; TaxID=1526653 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. SJY1.;"
soxA; sarcosine oxidase alpha subunit
Displaying 10 items

View Taxonomy